RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CTRCQ99895 268 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 LGR4Q9BXB1 951 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 WDR26Q9H7D7 661 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 CARS2Q9HA77 564 aaKnown RBP11.58□□□□□ -0.56
RNF4-216ENST00000511859 DONSONQ9NYP3 566 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 TMEM9Q9P0T7 183 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 ATP8A1Q9Y2Q0 1164 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 RPS6KL1Q9Y6S9 549 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 APCP25054 2843 aa11.58□□□□□ -0.56
RNF4-216ENST00000511859 BECN2A8MW95 431 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 PSMA7O14818 248 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 POLR1CO15160 346 aaPredicted RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 INSIG1O15503 277 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 DLGAP3O95886 979 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 PMS2P54278 862 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 MARSP56192 900 aaKnown RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 STIM1Q13586 685 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 ERV3-1Q14264 604 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 EIF2S3LQ2VIR3 472 aaKnown RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 MANEALQ5VSG8 457 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 C1QL3Q5VWW1 255 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 WDR74Q6RFH5 385 aaPredicted RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 CLEC17AQ6ZS10 378 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 SRRM1Q8IYB3 904 aaKnown RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 OR10G6Q8NH81 332 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 C18orf8Q96DM3 657 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 KCTD5Q9NXV2 234 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 KCND3Q9UK17 655 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 MRPS18BQ9Y676 258 aaKnown RBP11.57□□□□□ -0.56
RNF4-216ENST00000511859 ADGRG4Q8IZF6 3080 aa11.57□□□□□ -0.56
RNF4-216ENST00000511859 A8MU76 341 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 TEX33O43247 280 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 PIGNO95427 931 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 GNA14O95837 355 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 CEACAM5P06731 702 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 MYCLP1P12525 358 aaPredicted RBP11.56□□□□□ -0.56
RNF4-216ENST00000511859 F8A1P23610 371 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 AK4P27144 223 aaPredicted RBP11.56□□□□□ -0.56
RNF4-216ENST00000511859 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
RNF4-216ENST00000511859 ADRA1BP35368 520 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 DLSTP36957 453 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 GABRB2P47870 512 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 FASLGP48023 281 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 POLR2LP62875 67 aaKnown RBP11.56□□□□□ -0.56
RNF4-216ENST00000511859 PNOCQ13519 176 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 SLC30A9Q6PML9 568 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 LIPIQ6XZB0 460 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 ARCQ7LC44 396 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 FAM131BQ86XD5 332 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 ZNF354CQ86Y25 554 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 PRR7Q8TB68 274 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 PATE1Q8WXA2 126 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 MOCOSQ96EN8 888 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 TUBGCP5Q96RT8 1024 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 SLC38A3Q99624 504 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 SLC29A3Q9BZD2 475 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 PHPT1Q9NRX4 125 aaPredicted RBP11.56□□□□□ -0.56
RNF4-216ENST00000511859 LMBRD1Q9NUN5 540 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.56□□□□□ -0.56
RNF4-216ENST00000511859 POLEQ07864 2286 aa11.56□□□□□ -0.56
RNF4-216ENST00000511859 TCP11X1B4DZS4 312 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 SORBS2O94875 1100 aaKnown RBP11.55□□□□□ -0.56
RNF4-216ENST00000511859 SMC2O95347 1197 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 LDLRP01130 860 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 FUCA1P04066 466 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 PDGFAP04085 211 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 FURINP09958 794 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 ELFN1P0C7U0 828 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 FLT3P36888 993 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 PPP1R2P41236 205 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 PPM1FP49593 454 aaPredicted RBP11.55□□□□□ -0.56
RNF4-216ENST00000511859 CTBSQ01459 385 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 SEMA5AQ13591 1074 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 INPP5JQ15735 1006 aaPredicted RBP11.55□□□□□ -0.56
RNF4-216ENST00000511859 SNAP47Q5SQN1 464 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 FAM102AQ5T9C2 384 aaPredicted RBP11.55□□□□□ -0.56
RNF4-216ENST00000511859 AFMIDQ63HM1 303 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 LYSMD3Q7Z3D4 306 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 TMEM35BQ8NCS4 154 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 SHC3Q92529 594 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 ZNF768Q9H5H4 540 aaKnown RBP11.55□□□□□ -0.56
RNF4-216ENST00000511859 APMAPQ9HDC9 416 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 OAS3Q9Y6K5 1087 aaKnown RBP11.55□□□□□ -0.56
RNF4-216ENST00000511859 CELSR1Q9NYQ6 3014 aa11.55□□□□□ -0.56
RNF4-216ENST00000511859 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 CREG1O75629 220 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 LRIG2O94898 1065 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 GNPDA1P46926 289 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 YBEYP58557 167 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 UBE2HP62256 183 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 CYTH1Q15438 398 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 NADK2Q4G0N4 442 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 C6orf15Q6UXA7 325 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 XYLT1Q86Y38 959 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 TBC1D31Q96DN5 1066 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms