RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 C12orf42Q96LP6 360 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SEMA3CQ99985 751 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 CASS4Q9NQ75 786 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 LMCD1Q9NZU5 365 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 GMPR2Q9P2T1 348 aaKnown RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 EBF1Q9UH73 591 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SQORQ9Y6N5 450 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 FFAR3O14843 346 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 GPR42O15529 346 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 CLASP2O75122 1294 aaKnown RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 VPS26AO75436 327 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 MAGP20916 626 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 RPS9P46781 194 aaKnown RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 PIK3CGP48736 1102 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 ECT2LQ008S8 904 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 OVOS1Q6IE37 1185 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 NPWQ8N729 165 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 GPR152Q8TDT2 470 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SYTL2Q9HCH5 934 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 FBXW11Q9UKB1 542 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SCAMP3O14828 347 aaKnown RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 DNAJB2P25686 324 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 RABL3Q5HYI8 236 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 KLHL35Q6PF15 583 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 C8orf59Q8N0T1 100 aaPredicted RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 PPP1R2P1Q96PQ5 205 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 KCNA7Q96RP8 456 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 HNRNPABQ99729 332 aaKnown RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 RAD21L1Q9H4I0 556 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 AKTIPQ9H8T0 292 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 COMMD8Q9NX08 183 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SMPD3Q9NY59 655 aaPredicted RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 TAS2R13Q9NYV9 303 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 PRKAG2Q9UGJ0 569 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 IPPQ9Y573 584 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 ZCWPW2A0A1B0GU75 182 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 AURKAO14965 403 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 USP2O75604 605 aaPredicted RBP14.9□□□□□ -0.02
USP38-202ENST00000510377 PGK1P00558 417 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SMIM10L2AP0DMW4 78 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 SMIM10L2BP0DMW5 78 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 CD1EP15812 388 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 CDH3P22223 829 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 GLDCP23378 1020 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 BROXQ5VW32 411 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 R3HDMLQ9H3Y0 253 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 RIBC2Q9H4K1 309 aa14.9□□□□□ -0.02
USP38-202ENST00000510377 NPHS1O60500 1241 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 RAMP2O60895 175 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 PRKCGP05129 697 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 CDK4P11802 303 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 CDH2P19022 906 aaPredicted RBP14.89□□□□□ -0.03
USP38-202ENST00000510377 UGT1A1P22309 533 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 UGT1A4P22310 534 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 PCSK6P29122 969 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 OR1E1P30953 314 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 UGT1A3P35503 534 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 UGT1A5P35504 534 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 OR1G1P47890 313 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 TUBB3Q13509 450 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 GNASQ5JWF2 1037 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 RNF111Q6ZNA4 994 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 LRRC8DQ7L1W4 858 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SCAMP5Q8TAC9 235 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SEPT8Q92599 483 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 B3GALT6Q96L58 329 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SLC39A8Q9C0K1 460 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 ROGDIQ9GZN7 287 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 ABCG8Q9H221 673 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 ZFP14Q9HCL3 533 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 ZNF112Q9UJU3 913 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 IGKV6D-21A0A0A0MT36 114 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SNAP91O60641 907 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 PROZP22891 400 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SLC5A2P31639 672 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 CDK9P50750 372 aaKnown RBP14.89□□□□□ -0.03
USP38-202ENST00000510377 NDST2P52849 883 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SULT2A1Q06520 285 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 TMEM135Q86UB9 458 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 LPCAT1Q8NF37 534 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 CENPNQ96H22 339 aaPredicted RBP14.89□□□□□ -0.03
USP38-202ENST00000510377 TMEM74Q96NL1 305 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 PRDM16Q9HAZ2 1276 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 BPIFA1Q9NP55 256 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 C17orf102A2RUQ5 167 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 IRF1P10914 325 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 CYP4B1P13584 511 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 HERC3Q15034 1050 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 RAP1GAP2Q684P5 730 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 OGFOD2Q6N063 350 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 NPY6RQ99463 290 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 ASPSCR1Q9BZE9 553 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 ALG2Q9H553 416 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 VPS45Q9NRW7 570 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 SUCOQ9UBS9 1254 aaKnown RBP14.89□□□□□ -0.03
USP38-202ENST00000510377 PHF24Q9UPV7 400 aa14.89□□□□□ -0.03
USP38-202ENST00000510377 VILLO15195 856 aa14.88□□□□□ -0.03
USP38-202ENST00000510377 CBFA2T3O75081 653 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms