RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, human

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-211	ENST00000510171	SLC39A8	Q9C0K1	460 aa		10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	CDH19	Q9H159	772 aa		10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	NLRC4	Q9NPP4	1024 aa		10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	TAAR2	Q9P1P5	351 aa		10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	PCDHGA3	Q9Y5H0	932 aa		10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	MYO18B	Q8IUG5	2567 aa		10.43	□□□□□ -0.74
DDX41-211	ENST00000510171	RP1	P56715	2156 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	DAPK3	O43293	454 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	CEACAM5	P06731	702 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	MYCLP1	P12525	358 aa	Predicted RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	GM2A	P17900	193 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	CSTF2	P33240	577 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	CCR10	P46092	362 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	KLK7	P49862	253 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	SCNN1B	P51168	640 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	COPB1	P53618	953 aa	Known RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	LIMK2	P53671	638 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	POLE2	P56282	527 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	RPL7A	P62424	266 aa	Known RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	KCNAB2	Q13303	367 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	SQSTM1	Q13501	440 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	PEX6	Q13608	980 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	RFTN1	Q14699	578 aa	Predicted RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	NR1D2	Q14995	579 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	SYCP1	Q15431	976 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	NRROS	Q86YC3	692 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	PELI3	Q8N2H9	469 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	AGBL5	Q8NDL9	886 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	CCDC112	Q8NEF3	446 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	NEK11	Q8NG66	645 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	OR4D9	Q8NGE8	314 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	COQ10A	Q96MF6	247 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	MCEE	Q96PE7	176 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	TEX101	Q9BY14	249 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	SEPT11	Q9NVA2	429 aa	Known RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	KCTD5	Q9NXV2	234 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	SLC39A1	Q9NY26	324 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	LIMA1	Q9UHB6	759 aa	Known RBP	10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	SIK3	Q9Y2K2	1263 aa		10.42	□□□□□ -0.74
DDX41-211	ENST00000510171	TCRBV5S1A1T	A0A578	114 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	LRRC10B	A6NIK2	292 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	LGALS16	A8MUM7	142 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	EEF2K	O00418	725 aa	Known RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	TRAFD1	O14545	582 aa	Predicted RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	EPHB6	O15197	1021 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	FUCA1	P04066	466 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	LIF	P15018	202 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	CDK11B	P21127	795 aa	Known RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	AK4	P27144	223 aa	Predicted RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	UGT1A3	P35503	534 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	GNPDA1	P46926	289 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	RENBP	P51606	427 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	ARSD	P51689	593 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	UBXN1	Q04323	297 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	UBAP2L	Q14157	1087 aa	Known RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	CCDC183	Q5T5S1	534 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	NKAIN2	Q5VXU1	208 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	DCUN1D2	Q6PH85	259 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	SLC30A9	Q6PML9	568 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	MON1B	Q7L1V2	547 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	HEATR4	Q86WZ0	1026 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	CACNA2D3	Q8IZS8	1091 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	ART4	Q93070	314 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	NUS1	Q96E22	293 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	CATSPER2	Q96P56	530 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	ERGIC2	Q96RQ1	377 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	DPYSL5	Q9BPU6	564 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	DDA1	Q9BW61	102 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	ASPSCR1	Q9BZE9	553 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	NAT10	Q9H0A0	1025 aa	Known RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	DHX35	Q9H5Z1	703 aa	Known RBP	10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	SP110	Q9HB58	689 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	GPATCH2L	Q9NWQ4	482 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	ANKMY1	Q9P2S6	941 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	B4GALT6	Q9UBX8	382 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	TUBD1	Q9UJT1	453 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	SUFU	Q9UMX1	484 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	AP4E1	Q9UPM8	1137 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	B3GALT1	Q9Y5Z6	326 aa		10.41	□□□□□ -0.74
DDX41-211	ENST00000510171	PIEZO2	Q9H5I5	2752 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.4	□□□□□ -0.74
DDX41-211	ENST00000510171		A0A1W2PQ67	120 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	ZNF891	A8MT65	544 aa	Predicted RBP	10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	EIF3CL	B5ME19	914 aa	Known RBP	10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	DFFA	O00273	331 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	PPM1D	O15297	605 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	CAPN5	O15484	640 aa	Predicted RBP	10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	RAD1	O60671	282 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	NTRK1	P04629	796 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	CCDC172	P0C7W6	258 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	ERCC2	P18074	760 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	MPST	P25325	297 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	VIPR1	P32241	457 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	ADCY8	P40145	1251 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	AP1S1	P61966	158 aa		10.4	□□□□□ -0.74
DDX41-211	ENST00000510171	CDK3	Q00526	305 aa		10.4	□□□□□ -0.74

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