RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ELFN1P0C7U0 828 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 JMJD7P0C870 316 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 FGF3P11487 239 aaPredicted RBP13.39□□□□□ -0.27
DDX41-210ENST00000509576 PNLIPP16233 465 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 IL1R2P27930 398 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 CD1CP29017 333 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 MAPK10P53779 464 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 TRAF2Q12933 501 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 DPYSQ14117 519 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 PLEKHA7Q6IQ23 1121 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 USP53Q70EK8 1073 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 NAGSQ8N159 534 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 SCG3Q8WXD2 468 aaKnown RBP13.39□□□□□ -0.27
DDX41-210ENST00000509576 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 SLC12A9Q9BXP2 914 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 TEX101Q9BY14 249 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 STRADBQ9C0K7 418 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 DPEP2Q9H4A9 486 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 SUDS3Q9H7L9 328 aaPredicted RBP13.39□□□□□ -0.27
DDX41-210ENST00000509576 CWC15Q9P013 229 aaKnown RBP13.39□□□□□ -0.27
DDX41-210ENST00000509576 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 NPIPB15A6NHN6 443 aaPredicted RBP13.38□□□□□ -0.27
DDX41-210ENST00000509576 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.38□□□□□ -0.27
DDX41-210ENST00000509576 EEF2KO00418 725 aaKnown RBP13.38□□□□□ -0.27
DDX41-210ENST00000509576 ARHGAP6O43182 974 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 TEX33O43247 280 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 SUV39H1O43463 412 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
DDX41-210ENST00000509576 ECEL1O95672 775 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 EML2O95834 649 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 ATP1A3P13637 1013 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 CCNB1P14635 433 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 SERPINA4P29622 427 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 MIPP30301 263 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 ETV3P41162 512 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 SCNN1BP51168 640 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 AIF1P55008 147 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 KCNC4Q03721 635 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 GRM3Q14832 879 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 PHF19Q5T6S3 580 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 NKAIN2Q5VXU1 208 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 TXNRD3NBQ6F5E7 133 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 OR6C4Q8NGE1 309 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 FNIP1Q8TF40 1166 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 ATP13A3Q9H7F0 1226 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
DDX41-210ENST00000509576 TAAR2Q9P1P5 351 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
DDX41-210ENST00000509576 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 TMEM191CA6NGB0 347 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 ARHGAP42A6NI28 874 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 DFFAO00273 331 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 CACNB4O00305 520 aaPredicted RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 LRCH4O75427 683 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 HEXIM1O94992 359 aaKnown RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 ITGB2P05107 769 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 MPSTP25325 297 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 MAXP61244 160 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 BCL2L1Q07817 233 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.272e-6■□□□□ 8.3
DDX41-210ENST00000509576 IL10RBQ08334 325 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX41-210ENST00000509576 ACOX1Q15067 660 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 AMZ1Q400G9 498 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 CT47A1Q5JQC4 288 aaPredicted RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 ERMARDQ5T6L9 678 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 Q6ZVL8 140 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 TRIM74Q86UV6 250 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 NEK11Q8NG66 645 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 NKD1Q969G9 470 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 DTD2Q96FN9 168 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 CCDC74BQ96LY2 380 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 CINPQ9BW66 212 aaPredicted RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 WDR26Q9H7D7 661 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
DDX41-210ENST00000509576 NOD2Q9HC29 1040 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
DDX41-210ENST00000509576 A0A1W2PQC6 194 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 TMX2-CTNND1H3BSU7 103 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 MAFKO60675 156 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 CPNE6O95741 557 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 PDHA1P08559 390 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 AMPD1P23109 780 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 PSMA2P25787 234 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 HTR7P34969 479 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 GNPDA1P46926 289 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 CSRP3P50461 194 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 CDK3Q00526 305 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 CTBSQ01459 385 aa13.36□□□□□ -0.27
DDX41-210ENST00000509576 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms