RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CLPBQ9H078 707 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 SLC25A51Q9H1U9 297 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 GLOD4Q9HC38 313 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 PCDH9Q9HC56 1237 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 KCTD5Q9NXV2 234 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 SPASTQ9UBP0 616 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 TRIM10Q9UDY6 481 aa16.15■□□□□ 0.18
PDLIM5-212ENST00000509333 H3BM21 787 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 TPP1O14773 563 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 YY2O15391 372 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 FFAR2O15552 330 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 PCCBP05166 539 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 PYGMP11217 842 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 CDK4P11802 303 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ACP1P24666 158 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 PTPN3P26045 913 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 HTR1BP28222 390 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ETV3P41162 512 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ACADVLP49748 655 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 C1orf61Q13536 156 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 SMAD1Q15797 465 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 QPCTQ16769 361 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ALG11Q2TAA5 492 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 DENND2CQ68D51 928 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ESRP1Q6NXG1 681 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 USP45Q70EL2 814 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 PHACTR4Q8IZ21 702 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 LMX1AQ8TE12 382 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 DTD2Q96FN9 168 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 APOLD1Q96LR9 279 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 TBATAQ96M53 351 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 TRIB3Q96RU7 358 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 LYSMD1Q96S90 227 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 LGR4Q9BXB1 951 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ABCG8Q9H221 673 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 NLGN3Q9NZ94 848 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 AKAP13Q12802 2813 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 ASXL3Q9C0F0 2248 aa16.14■□□□□ 0.17
PDLIM5-212ENST00000509333 COL5A1P20908 1838 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 LY6G6EA0A0G2JKS1 128 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 CCDC66A2RUB6 948 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 TMEM202A6NGA9 273 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 TNFRSF10CO14798 259 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 AQP9O43315 295 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 CLDN7O95471 211 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 CKMT1AP12532 417 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 MYF5P13349 255 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 TSHRP16473 764 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 CD68P34810 354 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 BLKP51451 505 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 HK3P52790 923 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 EPHB1P54762 984 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 RWDD2BP57060 319 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 SRP54P61011 504 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 DPTQ07507 201 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 ILKQ13418 452 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 XRCC4Q13426 336 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 ARHGEF7Q14155 803 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 CCDC157Q569K6 752 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 PRRT3Q5FWE3 981 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 LRRC66Q68CR7 880 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 KCTD16Q68DU8 428 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 DHRS13Q6UX07 377 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 ZC3H18Q86VM9 953 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 HID1Q8IV36 788 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 CCDC50Q8IVM0 306 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 ALG3Q92685 438 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 GATA6Q92908 595 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 WDR92Q96MX6 357 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 RBM15Q96T37 977 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 MLPHQ9BV36 600 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 DUSP23Q9BVJ7 150 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 TEX101Q9BY14 249 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 OSBPL8Q9BZF1 889 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 SLC13A1Q9BZW2 595 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 SEPT10Q9P0V9 454 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 AMFRQ9UKV5 643 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 ADGRG1Q9Y653 693 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 DGKBQ9Y6T7 804 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 U3KQA8 63 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 PLXNB3Q9ULL4 1909 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 EPG5Q9HCE0 2579 aa16.13■□□□□ 0.17
PDLIM5-212ENST00000509333 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 TNFP01375 233 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 FUCA1P04066 466 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 CAPNS1P04632 268 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 ZNF30P17039 623 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 CA4P22748 312 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 TEAD1P28347 426 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 PTPN7P35236 360 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 STC1P52823 247 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 GSDMDP57764 484 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 KIAA1024LP59773 190 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 AADACL2Q6P093 401 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 RD3Q7Z3Z2 195 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 MARCH9Q86YJ5 346 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 RAVER1Q8IY67 606 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 RNF10Q8N5U6 811 aaKnown RBP16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 SPATA22Q8NHS9 363 aa16.12■□□□□ 0.17
PDLIM5-212ENST00000509333 OR1E3Q8WZA6 343 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms