RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 FTH1P19P0C7X4 201 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 NFKB1P19838 968 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 ARRB1P49407 418 aaPredicted RBP18.19■□□□□ 0.5
CLDND1-220ENST00000508902 PTSQ03393 145 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 GALNT3Q14435 633 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 DENND2CQ68D51 928 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 MACC1Q6ZN28 852 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 ZNF662Q6ZS27 426 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 Q6ZVL8 140 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 PARGQ86W56 976 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 RNF10Q8N5U6 811 aaKnown RBP18.19■□□□□ 0.5
CLDND1-220ENST00000508902 FAM174AQ8TBP5 190 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 PTCD2Q8WV60 388 aaKnown RBP18.19■□□□□ 0.5
CLDND1-220ENST00000508902 WDR24Q96S15 920 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 LYSMD1Q96S90 227 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 APOOQ9BUR5 198 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 DNAJC28Q9NX36 388 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 UBP1Q9NZI7 540 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 U3KQA8 63 aa18.19■□□□□ 0.5
CLDND1-220ENST00000508902 YKT6O15498 198 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 GCATO75600 419 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 ITGAVP06756 1048 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 CES1P23141 567 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 STC1P52823 247 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 DNAJC3Q13217 504 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 MTM1Q13496 603 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 ACOX1Q15067 660 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 ALG11Q2TAA5 492 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 ESRP1Q6NXG1 681 aaKnown RBP18.18■□□□□ 0.5
CLDND1-220ENST00000508902 DCP2Q8IU60 420 aaKnown RBP18.18■□□□□ 0.5
CLDND1-220ENST00000508902 PAF1Q8N7H5 531 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 ZNF548Q8NEK5 533 aaPredicted RBP18.18■□□□□ 0.5
CLDND1-220ENST00000508902 HTR3CQ8WXA8 447 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 IFT43Q96FT9 208 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 AGAP2Q99490 1192 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 C1QTNF7Q9BXJ2 289 aa18.18■□□□□ 0.5
CLDND1-220ENST00000508902 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 TMEM202A6NGA9 273 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
CLDND1-220ENST00000508902 SCAMP1O15126 338 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 CLDN7O95471 211 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 PIRTP0C851 137 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 MYF5P13349 255 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 TRIM23P36406 574 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 YPEL5P62699 121 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 FOXC1Q12948 553 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 XRCC4Q13426 336 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 NFATC4Q14934 902 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 SUZ12Q15022 739 aaKnown RBP18.17■□□□□ 0.5
CLDND1-220ENST00000508902 SLC14A2Q15849 920 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 PROX2Q3B8N5 592 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 USP45Q70EL2 814 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 KDELC2Q7Z4H8 507 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 SYCE1Q8N0S2 351 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 OR1E3Q8WZA6 343 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 SCAMP4Q969E2 229 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 NUS1Q96E22 293 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 PDXPQ96GD0 296 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 LRRC61Q9BV99 259 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 CLPBQ9H078 707 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 USP29Q9HBJ7 922 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 FGF22Q9HCT0 170 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 LZTFL1Q9NQ48 299 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 CD84Q9UIB8 345 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 SPO11Q9Y5K1 396 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 ARHGEF17Q96PE2 2063 aaPredicted RBP18.17■□□□□ 0.5
CLDND1-220ENST00000508902 FREM2Q5SZK8 3169 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 USP24Q9UPU5 2620 aa18.17■□□□□ 0.5
CLDND1-220ENST00000508902 EPG5Q9HCE0 2579 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 RP1P56715 2156 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 HACD1B0YJ81 288 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 PSMD11O00231 422 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 SIGLEC6O43699 453 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 HYAL3O43820 417 aaPredicted RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 FUCA1P04066 466 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 CYP2A6P11509 494 aaPredicted RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 CLDN6P56747 220 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 RPL26P61254 145 aaKnown RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 FOXK2Q01167 660 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 OLIG2Q13516 323 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 PCSK7Q16549 785 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 PNCKQ6P2M8 343 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 RAB44Q7Z6P3 723 aaPredicted RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 PHACTR4Q8IZ21 702 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 TSACCQ96A04 125 aaPredicted RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 MRGPRX2Q96LB1 330 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 MLPHQ9BV36 600 aaPredicted RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 TSGA10Q9BZW7 698 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 ABCG8Q9H221 673 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 RPL26L1Q9UNX3 145 aaKnown RBP18.16■□□□□ 0.5
CLDND1-220ENST00000508902 PPP2R2CQ9Y2T4 447 aa18.16■□□□□ 0.5
CLDND1-220ENST00000508902 ANKRD66B4E2M5 251 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 H7C0C1 242 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 FFAR2O15552 330 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 KRT86O43790 486 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 PMPCBO75439 489 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 CCDC175P0C221 793 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 RBP3P10745 1247 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 JUNDP17535 347 aa18.15■□□□□ 0.5
CLDND1-220ENST00000508902 CHRNA4P43681 627 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms