RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 UPB1Q9UBR1 384 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MBD1Q9UIS9 605 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 NPIPA1Q9UND3 350 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SQORQ9Y6N5 450 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ARHGEF35A5YM69 484 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RSPH10B2B2RC85 870 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RNF13O43567 381 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SEC22BO75396 215 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 EIF2S1P05198 315 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RSPH10BP0C881 870 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PFKFB1P16118 471 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 U2AF2P26368 475 aaKnown RBP eCLIP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 GLRBP48167 497 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CAMPP49913 170 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM115Q12893 351 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 GRM4Q14833 912 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 DDI2Q5TDH0 399 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 LGSNQ5TDP6 509 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 C12orf60Q5U649 245 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PTRHD1Q6GMV3 140 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CENPPQ6IPU0 288 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FSTL4Q6MZW2 842 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CNKSR3Q6P9H4 555 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KCNV1Q6PIU1 500 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC121Q6ZUS5 278 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 AMIGO3Q86WK7 504 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FOXP4Q8IVH2 680 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TRMT44Q8IYL2 757 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CADM4Q8NFZ8 388 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 OR8K5Q8NH50 307 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CEP76Q8TAP6 659 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CDKL2Q92772 493 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PGAP3Q96FM1 320 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ZFYVE19Q96K21 471 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FAM167AQ96KS9 214 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 C11orf70Q9BRQ4 267 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 NUSAP1Q9BXS6 441 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ATXN3LQ9H3M9 355 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ADA2Q9NZK5 511 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SPATA7Q9P0W8 599 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 BTBD7Q9P203 1132 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ANKFY1Q9P2R3 1169 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RIMKLBQ9ULI2 386 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PLCL2Q9UPR0 1127 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ATRNL1Q5VV63 1379 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TRPC5OSA6NMA1 111 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 POTEB2H3BUK9 544 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 LINC01387J3KSC0 135 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RGS20O76081 388 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 OAZ2O95190 189 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CA3P07451 260 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 AREGP15514 252 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CTSOP43234 321 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TUFMP49411 452 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 MEOX1P50221 254 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RAP1GDS1P52306 607 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PTPN11Q06124 597 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ELP6Q0PNE2 266 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 KCNMA1Q12791 1236 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RAB39AQ14964 217 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GSTA3Q16772 222 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RNF151Q2KHN1 245 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SLC35G1Q2M3R5 365 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 WLSQ5T9L3 541 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PRAMEF20Q5VT98 475 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 BICRALQ6AI39 1079 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF425Q6IV72 752 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CDC73Q6P1J9 531 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PAOXQ6QHF9 649 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SCN4BQ8IWT1 228 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 DDIASQ8IXT1 998 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 RBM12BQ8IXT5 1001 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 TSPAN14Q8NG11 270 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SUN3Q8TAQ9 357 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GPT2Q8TD30 523 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 INTS12Q96CB8 462 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SEMA3CQ99985 751 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 C7orf50Q9BRJ6 194 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 KCNH7Q9NS40 1196 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SETD4Q9NVD3 440 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PARVAQ9NVD7 372 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 ERAP1Q9NZ08 941 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 SELENONQ9NZV5 590 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CDYLQ9Y232 598 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PIN4Q9Y237 131 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 C15orf41Q9Y2V0 281 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHB6Q9Y5E3 794 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 LGALS8O00214 317 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 FSCN2O14926 492 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 MDM4O15151 490 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 KINO60870 393 aaKnown RBP3.93□□□□□ -1.78
NEDD4-209ENST00000508871 OPHN1O60890 802 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 HSBP1O75506 76 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 PGLSO95336 258 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CHEK2O96017 543 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 AGTP01019 485 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 CSF2P04141 144 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GSTT2P0CG29 244 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GSTT2BP0CG30 244 aa3.93□□□□□ -1.78
NEDD4-209ENST00000508871 GNSP15586 552 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms