RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SYNDIG1Q9H7V2 258 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 TRNAU1APQ9NX07 287 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 AKAP7Q9P0M2 348 aaPredicted RBP13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 SIRPGQ9P1W8 387 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 B4GALT6Q9UBX8 382 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 PPIL1Q9Y3C6 166 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 PCDHGA7Q9Y5G6 932 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
CCHCR1-227ENST00000508852 PRSS38A1L453 326 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 TMEM202A6NGA9 273 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 CDRT15L2A8MXV6 281 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 D6RAR5 112 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PLD2O14939 933 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 KLK10O43240 276 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 HEXIM1O94992 359 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PEX11BO96011 259 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 KRT7P08729 469 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 ZNF30P17039 623 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 MX2P20592 715 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PBX1P40424 430 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 SKOR1P84550 965 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 SLC25A11Q02978 314 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 DPTQ07507 201 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 ILF3Q12906 894 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 C14orf28Q4W4Y0 310 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 CERCAMQ5T4B2 595 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 CCNJLQ8IV13 435 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 FBXO39Q8N4B4 442 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 TEX26Q8N6G2 289 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PLA2G15Q8NCC3 412 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 FAM71BQ8TC56 605 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 SNRNP27Q8WVK2 155 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 OR1E3Q8WZA6 343 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PDXPQ96GD0 296 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 TEX101Q9BY14 249 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 B3GNT4Q9C0J1 378 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 THAP2Q9H0W7 228 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 DPEP2Q9H4A9 486 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 NOD2Q9HC29 1040 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PCDH18Q9HCL0 1135 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 PCDHGC4Q9Y5F7 938 aa13.61□□□□□ -0.23
CCHCR1-227ENST00000508852 LOC400499M0QZD8 3231 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 TNFSF15O95150 251 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 PGLSO95336 258 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 PRKCGP05129 697 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 RPLP0P05388 317 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CELA2BP08218 269 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 SSR1P43307 286 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 VAC14Q08AM6 782 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CNGA3Q16281 694 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 IFI16Q16666 785 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CRTC1Q6UUV9 634 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 RAB11FIP2Q7L804 512 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CBARPQ8N350 705 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 KCTD6Q8NC69 237 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 GPBAR1Q8TDU6 330 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 DTD2Q96FN9 168 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CRELD1Q96HD1 420 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 BBC3Q96PG8 261 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 MCCC1Q96RQ3 725 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 DPYSL5Q9BPU6 564 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 ZNF670Q9BS34 389 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CAAP1Q9H8G2 361 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 CBX8Q9HC52 389 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 FGF22Q9HCT0 170 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 LRIT1Q9P2V4 623 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 MOSPD1Q9UJG1 213 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 RPL26L1Q9UNX3 145 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
CCHCR1-227ENST00000508852 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 MATN3O15232 486 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 TPM1P09493 284 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 H2AFZP0C0S5 128 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 JMJD7P0C870 316 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CCNB1P14635 433 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CCNCP24863 283 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 GARSP41250 739 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 GPR3P46089 330 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 EPHB1P54762 984 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CCL7P80098 99 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ITKQ08881 620 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 GALNT2Q10471 571 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 BIRC2Q13490 618 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 TRIM14Q14142 442 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 PAFAH1B3Q15102 231 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 SPECC1LQ69YQ0 1117 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ALG1LQ6GMV1 187 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 FOXR1Q6PIV2 292 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 H2AFVQ71UI9 128 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ZNF765Q7L2R6 523 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 HEATR4Q86WZ0 1026 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 NRSN1Q8IZ57 195 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ZNF564Q8TBZ8 553 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms