RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CSNK1EP49674 416 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 CCT8P50990 548 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 THOP1P52888 689 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 MTM1Q13496 603 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 SNX1Q13596 522 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 LAMB3Q13751 1172 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 GALNT3Q14435 633 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 SF3A2Q15428 464 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 SLC1A5Q15758 541 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 CNGA3Q16281 694 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 QPCTQ16769 361 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 LRRC66Q68CR7 880 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 ZNF765Q7L2R6 523 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 NRSN1Q8IZ57 195 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 KLK6Q92876 244 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 MAGOHBQ96A72 148 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 CENPTQ96BT3 561 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 NUS1Q96E22 293 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 DTD2Q96FN9 168 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 TRIB3Q96RU7 358 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 GTPBP2Q9BX10 602 aaKnown RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 GPR63Q9BZJ6 419 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 SMOC1Q9H4F8 434 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 PARD6AQ9NPB6 346 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 UBP1Q9NZI7 540 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 A0A1W2PR77 199 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 C2orf81A6NN90 581 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 PATE3B3GLJ2 98 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 H3BM21 787 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 CACNB4O00305 520 aaPredicted RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 PRKCGP05129 697 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 ALPIP09923 528 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 TEAD1P28347 426 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 CTSKP43235 329 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 BLKP51451 505 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 STC1P52823 247 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 NXPH1P58417 271 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 DPTQ07507 201 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 FGL2Q14314 439 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 SIX1Q15475 284 aaPredicted RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 CYP1B1Q16678 543 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 KIF19Q2TAC6 998 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 DENND2CQ68D51 928 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 TCEAL6Q6IPX3 200 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 ESRP1Q6NXG1 681 aaKnown RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 CRTC1Q6UUV9 634 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 KDELC1Q6UW63 502 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 GCNT7Q6ZNI0 430 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 Q6ZSR6 202 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 KDELC2Q7Z4H8 507 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 GLT6D1Q7Z4J2 308 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 NLRP8Q86W28 1048 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 PARGQ86W56 976 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 MINDY1Q8N5J2 469 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 TCEAL3Q969E4 200 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 OXNAD1Q96HP4 312 aaPredicted RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 MRGPRX2Q96LB1 330 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 COQ10AQ96MF6 247 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 NSMCE3Q96MG7 304 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 WDR24Q96S15 920 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 MYOCQ99972 504 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 C19orf43Q9BQ61 176 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 TBL1YQ9BQ87 522 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 GAREM1Q9H706 876 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 WDR26Q9H7D7 661 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 C10orf88Q9H8K7 445 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 EBF2Q9HAK2 575 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 FZD3Q9NPG1 666 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 PHPT1Q9NRX4 125 aaPredicted RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 PKP3Q9Y446 797 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 ZNF711Q9Y462 761 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 PCDHGB2Q9Y5G2 931 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.14□□□□□ -0.95
NUP54-207ENST00000508583 PLXNA2O75051 1894 aa9.14□□□□□ -0.95
NUP54-207ENST00000508583 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 A8MX80 341 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 CCDC188H7C350 402 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 NDC80O14777 642 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 RAD51BO15315 384 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PHF2O75151 1096 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 CRTAMO95727 393 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 AP2A1O95782 977 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PCCBP05166 539 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 HOXC4P09017 264 aaPredicted RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 ITIH2P19823 946 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 LHCGRP22888 699 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 IGFALSP35858 605 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 HMGCLP35914 325 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 GDF10P55107 478 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 DCDC1P59894 354 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PFN3P60673 137 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 HNRNPKP61978 463 aaKnown RBP eCLIP9.13□□□□□ -0.95
NUP54-207ENST00000508583 SARNPP82979 210 aaKnown RBP9.13□□□□□ -0.95
NUP54-207ENST00000508583 CDK16Q00536 496 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 PTSQ03393 145 aa9.13□□□□□ -0.95
NUP54-207ENST00000508583 INPP5AQ14642 412 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms