RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RPA3P35244 121 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PLTPP55058 493 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SESN2P58004 480 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ALDH6A1Q02252 535 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RBPJQ06330 500 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C19orf57Q0VDD7 668 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PDK1Q15118 436 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CLPPQ16740 277 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RTP2Q5QGT7 225 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EEF1DP3Q658K8 133 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FAM183BPQ6ZVS7 135 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ZC3H18Q86VM9 953 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CDK20Q8IZL9 346 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KIRREL3Q8IZU9 778 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RASGEF1AQ8N9B8 481 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF564Q8TBZ8 553 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF507Q8TCN5 953 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 HCAR2Q8TDS4 363 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 NDRG1Q92597 394 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KRT35Q92764 455 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RPL10LQ96L21 214 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ACOX2Q99424 681 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 OSBPL1AQ9BXW6 950 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CDH19Q9H159 772 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RERGLQ9H628 205 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 DHX33Q9H6R0 707 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CYP4F12Q9HCS2 524 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FZD3Q9NPG1 666 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MRPL40Q9NQ50 206 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PADI4Q9UM07 663 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MGAT4DA6NG13 374 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 GOLGA8RI6L899 631 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 COCHO43405 550 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 OR10H2O60403 315 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 GUCY1B2O75343 617 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 PMPCBO75439 489 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 SERPINI2O75830 405 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 FKBP9O95302 570 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 APRTP07741 180 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 OR56A5P0C7T3 313 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 UBTFL6P0CB48 400 aaPredicted RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 PFKLP17858 780 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 MPLP40238 635 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 KCNJ5P48544 419 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 NEK3P51956 506 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 HNRNPKP61978 463 aaKnown RBP eCLIP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 TNK2Q07912 1038 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 SF3A2Q15428 464 aaKnown RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 TRIP13Q15645 432 aaPredicted RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 TRIP6Q15654 476 aaKnown RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CARD16Q5EG05 197 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 MRNIPQ6NTE8 343 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 ALKBH5Q6P6C2 394 aaKnown RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CRTC1Q6UUV9 634 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 FKBP9P1Q75LS8 142 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 KBTBD6Q86V97 674 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 SIDT2Q8NBJ9 832 aaKnown RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 LINC00301Q8NCQ3 95 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 ZDHHC1Q8WTX9 485 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 TSACCQ96A04 125 aaPredicted RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 SNF8Q96H20 258 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL32Q96NJ5 620 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 BTBD9Q96Q07 612 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CCT7Q99832 543 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CCSER1Q9C0I3 900 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 HAUS4Q9H6D7 363 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 ACTR5Q9H9F9 607 aaPredicted RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 BATF3Q9NR55 127 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 KRT84Q9NSB2 600 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 MIOSQ9NXC5 875 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL28Q9NXS3 571 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 IL1RAPL1Q9NZN1 696 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CEP72Q9P209 647 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 TBK1Q9UHD2 729 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CDC23Q9UJX2 597 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 SLC6A14Q9UN76 642 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 FCF1Q9Y324 198 aaKnown RBP2.96□□□□□ -1.93
NEDD4-208ENST00000508342 CITO14578 2027 aa2.96□□□□□ -1.93
NEDD4-208ENST00000508342 WDR91A4D1P6 747 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MYO1GB0I1T2 1018 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 FGF10O15520 208 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 MEFVO15553 781 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 WFS1O76024 890 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ANXA9O76027 345 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SLC34A2O95436 690 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 BPNT1O95861 308 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ECDO95905 644 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ATP4AP20648 1035 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 LMO2P25791 158 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 PPP2R1BP30154 601 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 AVPR1BP47901 424 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 SEPHS1P49903 392 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 INHBCP55103 352 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 TMPRSS3P57727 454 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 RPS15P62841 145 aaKnown RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 HTRA4P83105 476 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DEFB133Q30KQ1 61 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 ARMC4Q5T2S8 1044 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 DCAF12Q5T6F0 453 aa2.96□□□□□ -1.94
NEDD4-208ENST00000508342 KLHL24Q6TFL4 600 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms