RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 MMP13P45452 471 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 ARSEP51690 589 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 UBASH3AP57075 661 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 TMPRSS3P57727 454 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CCL7P80098 99 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 ALKBH5Q6P6C2 394 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 OGFOD3Q6PK18 319 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 PCSK4Q6UW60 755 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 GPR155Q7Z3F1 870 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CLEC14AQ86T13 490 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 OR6C4Q8NGE1 309 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CCL4L1Q8NHW4 92 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 DTD2Q96FN9 168 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 GFM1Q96RP9 751 aaKnown RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 MCCC1Q96RQ3 725 aaPredicted RBP13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 FOXP3Q9BZS1 431 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CYP4F12Q9HCS2 524 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 CAPN11Q9UMQ6 739 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 PHTF1Q9UMS5 762 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 NENFQ9UMX5 172 aa13.02□□□□□ -0.33
HMGCS1-205ENST00000508319 PIEZO2Q9H5I5 2752 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 A0A1W2PQ67 120 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 EIF4E1BA6NMX2 242 aaKnown RBP13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 B4DGG1 531 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 PSMD11O00231 422 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 PGLSO95336 258 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 PRB1P04280 392 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 RPLP0P05388 317 aaKnown RBP13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 ITGA2BP08514 1039 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 ETV3P41162 512 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 UCNP55089 124 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 DPYSL3Q14195 570 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 HLTFQ14527 1009 aaKnown RBP eCLIP13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 KRT81Q14533 505 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 PTPRRQ15256 657 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 MARC1Q5VT66 337 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 FOXR1Q6PIV2 292 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 TSPAN33Q86UF1 283 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 HEATR4Q86WZ0 1026 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 CCNJLQ8IV13 435 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 CBARPQ8N350 705 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 BBS5Q8N3I7 341 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 ARL14Q8N4G2 192 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 TEX26Q8N6G2 289 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 ZNF564Q8TBZ8 553 aaPredicted RBP13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 NSMCE1Q8WV22 266 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 CPLX3Q8WVH0 158 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 IQCDQ96DY2 449 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 TEX101Q9BY14 249 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 CPNE5Q9HCH3 593 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 NT5MQ9NPB1 228 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 APPL1Q9UKG1 709 aa13.01□□□□□ -0.33
HMGCS1-205ENST00000508319 COL6A6A6NMZ7 2263 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 A0A0U1RQS6 177 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 TK2O00142 265 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 MYO1FO00160 1098 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 PLD2O14939 933 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 KLK10O43240 276 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 FZD6O60353 706 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 TNFSF15O95150 251 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 SOD1P00441 154 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 FUCA1P04066 466 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 GLB1P16278 677 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 NFKBIAP25963 317 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 CCKBRP32239 447 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 GARSP41250 739 aaKnown RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 TPM4P67936 248 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 CDK3Q00526 305 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 GALNT2Q10471 571 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 IHHQ14623 411 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 ATP13A4Q4VNC1 1196 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 C14orf28Q4W4Y0 310 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 ARMC12Q5T9G4 340 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 BROXQ5VW32 411 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 DENND2CQ68D51 928 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 NCBP2-AS2Q69YL0 99 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 ALG1LQ6GMV1 187 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 USP45Q70EL2 814 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 SPRED1Q7Z699 444 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 LSM14AQ8ND56 463 aaKnown RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 GPBAR1Q8TDU6 330 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 PTCD2Q8WV60 388 aaKnown RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 PIH1D2Q8WWB5 315 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 SCRN2Q96FV2 425 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 FRMD8Q9BZ67 464 aaPredicted RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 DPH1Q9BZG8 443 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 LRRN3Q9H3W5 708 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 CARS2Q9HA77 564 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms