RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LRPPRCP42704 1394 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SYCP2Q9BX26 1530 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ANXA2P2A6NMY6 339 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 HIP1O00291 1037 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CYR61O00622 381 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CLIC2O15247 247 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 B4GALT2O60909 372 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FRAT2O75474 233 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TAF5LO75529 589 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 MYO1DO94832 1006 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 TGM6O95932 706 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 AGTP01019 485 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SERPING1P05155 500 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PLS3P13797 630 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SYN1P17600 705 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 NFKB1P19838 968 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FRKP42685 505 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CEBPZQ03701 1054 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SPP2Q13103 211 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 PGM5Q15124 567 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 DECR1Q16698 335 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM98BQ52LJ0 330 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 VWA5B1Q5TIE3 1220 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CEP85Q6P2H3 762 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 NHLRC1Q6VVB1 395 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM228AQ86W67 206 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CDKL3Q8IVW4 592 aaPredicted RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 C17orf47Q8NEP4 570 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 RDM1Q8NG50 284 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 LKAAEAR1Q8TD35 194 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 SCFD1Q8WVM8 642 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 MRGPRX4Q96LA9 322 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 NSMCE2Q96MF7 247 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 CPEB1Q9BZB8 566 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 ZDHHC18Q9NUE0 388 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 FAM118AQ9NWS6 357 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 GPRC5DQ9NZD1 345 aa7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 NSFL1CQ9UNZ2 370 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-206ENST00000508170 MYO5CQ9NQX4 1742 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 PRAG1Q86YV5 1406 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ARHGAP5Q13017 1502 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ABCC2Q92887 1545 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 TMEM120BA0PK00 339 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 PIK3R2O00459 728 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 RAD51BO15315 384 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 SEPT4O43236 478 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ADCY6O43306 1168 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 FGBP02675 491 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 CELA3BP08861 270 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ITIH1P19827 911 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ATP5C1P36542 298 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 TIRAPP58753 221 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 MGAT2Q10469 447 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 NKG7Q16617 165 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 DOK7Q18PE1 504 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 Q5PR19 223 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 DGAT2L7PQ6IED9 249 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 UNQ6494/PRO21346Q6UXR6 183 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 USP50Q70EL3 339 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ASPGQ86U10 573 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 CFAP61Q8NHU2 1237 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 CYB5D2Q8WUJ1 264 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 RHBDF1Q96CC6 855 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 SAAL1Q96ER3 474 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 DTD2Q96FN9 168 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 QRFPRQ96P65 431 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 WDR83Q9BRX9 315 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 ADI1Q9BV57 179 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 MRPL1Q9BYD6 325 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 GRIP2Q9C0E4 1043 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 C8orf4Q9NR00 106 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 FBXL17Q9UF56 701 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 CHRNA9Q9UGM1 479 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 IL20RAQ9UHF4 553 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 CNTN6Q9UQ52 1028 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 NUMBLQ9Y6R0 609 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 PLEKHH2Q8IVE3 1493 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 CCDC144AA2RUR9 1427 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 TRPM1Q7Z4N2 1603 aa7.53□□□□□ -1.2
PDGFRA-206ENST00000508170 PLA2R1Q13018 1463 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 LOC105371267A0A1B0GV96 52 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 A0A1W2PQF6 199 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 TCRBV21S2A2A0A5A6 115 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 MEI4A8MW99 385 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 H0Y8X5 98 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 ARHGEF9O43307 516 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 MED24O75448 989 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 CDK14O94921 469 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 CLTAP09496 248 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 IQCF3P0C7M6 154 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 MSNP26038 577 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 HOXA13P31271 388 aaPredicted RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 CDH15P55291 814 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 WNT3P56703 355 aa7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 EEF1A1P68104 462 aaKnown RBP7.52□□□□□ -1.2
PDGFRA-206ENST00000508170 ATP2C1P98194 919 aaPredicted RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms