RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 FLRT1Q9NZU1 646 aa9.62□□□□□ -0.87
PHF3-208ENST00000506783 FBXW11Q9UKB1 542 aa9.62□□□□□ -0.87
PHF3-208ENST00000506783 LRFN2Q9ULH4 789 aa9.62□□□□□ -0.87
PHF3-208ENST00000506783 PADI3Q9ULW8 664 aa9.62□□□□□ -0.87
PHF3-208ENST00000506783 PSMD13Q9UNM6 376 aa9.62□□□□□ -0.87
PHF3-208ENST00000506783 ATG2BQ96BY7 2078 aa9.62□□□□□ -0.87
PHF3-208ENST00000506783 CLOCKO15516 846 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 OR1I1O60431 355 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 GSRP00390 522 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 RAP1GDS1P52306 607 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 BFSP2Q13515 415 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 NR6A1Q15406 480 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 HECTD2Q5U5R9 776 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 GALNT5Q7Z7M9 940 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 LZTR1Q8N653 840 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 NPY6RQ99463 290 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 ETAA1Q9NY74 926 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 AAR2Q9Y312 384 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 NPEPPSL1A6NEC2 478 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 CDC7O00311 574 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 MATN2O00339 956 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 GRID2O43424 1007 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 SYNCRIPO60506 623 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 NBNO60934 754 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 NOL3O60936 208 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 ANXA9O76027 345 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 GLP2RO95838 553 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 HSPA8P11142 646 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 MAP4P27816 1152 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 EEF1DP29692 281 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 AQP1P29972 269 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 SERPINH1P50454 418 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 NIPAL4Q0D2K0 466 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 LBRQ14739 615 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 IQSEC1Q6DN90 963 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 OGFOD2Q6N063 350 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 TPGS1Q6ZTW0 290 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 UNC93AQ86WB7 457 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 MFSD6LQ8IWD5 586 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 SMG8Q8ND04 991 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 OR10T2Q8NGX3 314 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 ACTRT2Q8TDY3 377 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 C17orf80Q9BSJ5 609 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 ROGDIQ9GZN7 287 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 POLR1BQ9H9Y6 1135 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 STARD7Q9NQZ5 370 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.61□□□□□ -0.876e-9■■■■□ 23.2
PHF3-208ENST00000506783 MYO15AQ9UKN7 3530 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 CACNA1IQ9P0X4 2223 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 A0A1B0GTL3 188 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 CCNT2O60583 730 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 NIPSNAP2O75323 286 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 SNRPB2P08579 225 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 IL10P22301 178 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 CCL23P55773 120 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 TBX4P57082 545 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 OCA2Q04671 838 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 STX5Q13190 355 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 UGP2Q16851 508 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 PAQR3Q6TCH7 311 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 SZRD1Q7Z422 152 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 DENND1CQ8IV53 801 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 HS3ST5Q8IZT8 346 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 MYLIPQ8WY64 445 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 RMND5BQ96G75 393 aaPredicted RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 GBA3Q9H227 469 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 SSU72Q9NP77 194 aaKnown RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 DMAP1Q9NPF5 467 aaPredicted RBP9.61□□□□□ -0.87
PHF3-208ENST00000506783 OAZ3Q9UMX2 235 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 CDC14AQ9UNH5 594 aa9.61□□□□□ -0.87
PHF3-208ENST00000506783 A8MT66 165 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 F8W8V4 182 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CA12O43570 354 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 RAMP2O60895 175 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 NTRK1P04629 796 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 MPOP05164 745 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CNTFP26441 200 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CDKN2DP55273 166 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 POU4F1Q01851 419 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CTXN3Q4LDR2 81 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 REP15Q6BDI9 236 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 IL27RAQ6UWB1 636 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 SLC44A2Q8IWA5 706 aaPredicted RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 MMADHCQ9H3L0 296 aaPredicted RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 AKTIPQ9H8T0 292 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 STK39Q9UEW8 545 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 ATP11BQ9Y2G3 1177 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 NDUFAF1Q9Y375 327 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 E9PAM4 449 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 SH3BP5O60239 455 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 FESP07332 822 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 SLC18A1P54219 525 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 MTTPP55157 894 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 TAF10Q12962 218 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CPSF6Q16630 551 aaKnown RBP eCLIP9.6□□□□□ -0.87
PHF3-208ENST00000506783 HS6ST3Q8IZP7 471 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 LRRC52Q8N7C0 313 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms