RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MAATS1Q7Z4T9 603 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 TTC30BQ8N4P2 665 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 MMGT1Q8N4V1 131 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 NAT8LQ8N9F0 302 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-210ENST00000506767 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 OR52K1Q8NGK4 314 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 TRIM51Q9BSJ1 452 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 L2HGDHQ9H9P8 463 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 ZFYVE1Q9HBF4 777 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 KCTD5Q9NXV2 234 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 RAB23Q9ULC3 237 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 PCDHGA5Q9Y5G8 931 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 SLCO1B1Q9Y6L6 691 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 PRAMEF26H0Y7S4 382 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 WNT9AO14904 365 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 RAD51BO15315 384 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 SLC31A1O15431 190 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 LZTS3O60299 673 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-210ENST00000506767 RECQL5O94762 991 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-210ENST00000506767 TMEM63AO94886 807 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
TCOF1-210ENST00000506767 HOXD12P35452 270 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 HMGCLP35914 325 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 DPP6P42658 865 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 RNASEH2BQ5TBB1 312 aaKnown RBP12.84□□□□□ -0.35
TCOF1-210ENST00000506767 LRRC8BQ6P9F7 803 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 PCGF5Q86SE9 256 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 NLRP8Q86W28 1048 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 SYT12Q8IV01 421 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 PPIL6Q8IXY8 311 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 RGL4Q8IZJ4 473 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 MCUQ8NE86 351 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 DENND6BQ8NEG7 585 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 BRSK1Q8TDC3 778 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 BLOC1S5Q8TDH9 187 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 SNX19Q92543 992 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 DTD2Q96FN9 168 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 ASIC3Q9UHC3 531 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 SHOC2Q9UQ13 582 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 HS3ST3A1Q9Y663 406 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 MYLKQ15746 1914 aa12.84□□□□□ -0.35
TCOF1-210ENST00000506767 A0A1W2PR77 199 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 RGSL1A5PLK6 1076 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 AP3B1O00203 1094 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 TP73O15350 636 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 RETP07949 1114 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 TPH1P17752 444 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ETV3P41162 512 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 SPINT3P49223 89 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 DPTQ07507 201 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ACOX1Q15067 660 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 TAF1AQ15573 450 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 WSCD2Q2TBF2 565 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 PLA2G2CQ5R387 149 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 DENND2CQ68D51 928 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 PPP1R21Q6ZMI0 780 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 RFLNAQ6ZTI6 216 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 Q6ZVL8 140 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ZNF765Q7L2R6 523 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 NRSN1Q8IZ57 195 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 DNAAF3Q8N9W5 541 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 NOA1Q8NC60 698 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 PIGKQ92643 395 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 SERAC1Q96JX3 654 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 BMFQ96LC9 184 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 C19orf43Q9BQ61 176 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ERP44Q9BS26 406 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 LRRC1Q9BTT6 524 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 CARD6Q9BX69 1037 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 C1QTNF7Q9BXJ2 289 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 GPR63Q9BZJ6 419 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ABCG8Q9H221 673 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 TM9SF3Q9HD45 589 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 FZD3Q9NPG1 666 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 MBNL1Q9NR56 388 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 PIH1D1Q9NWS0 290 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 PKD2L2Q9NZM6 624 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 IL17CQ9P0M4 197 aa12.83□□□□□ -0.36
TCOF1-210ENST00000506767 NFKBIL1Q9UBC1 381 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ZFHX2Q9C0A1 2572 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 ATXN2Q99700 1313 aaKnown RBP12.83□□□□□ -0.36
TCOF1-210ENST00000506767 DMDP11532 3685 aa12.82□□□□□ -0.36
TCOF1-210ENST00000506767 A0A1B0GTW7 788 aa12.82□□□□□ -0.36
TCOF1-210ENST00000506767 EFCAB8A8MWE9 144 aa12.82□□□□□ -0.36
TCOF1-210ENST00000506767 PRR5-ARHGAP8B1AHC4 643 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms