RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 FCRL5Q96RD9 977 aa16.7■□□□□ 0.26
SNCA-209ENST00000506244 GBA3Q9H227 469 aa16.7■□□□□ 0.26
SNCA-209ENST00000506244 WDR26Q9H7D7 661 aa16.7■□□□□ 0.26
SNCA-209ENST00000506244 CABIN1Q9Y6J0 2220 aa16.7■□□□□ 0.26
SNCA-209ENST00000506244 C1orf232A0A0U1RR37 186 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 PDE2AO00408 941 aaPredicted RBP16.69■□□□□ 0.26
SNCA-209ENST00000506244 KCNN4O15554 427 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 CBFA2T3O75081 653 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 ANXA9O76027 345 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 NDST3O95803 873 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 CSF2P04141 144 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 ALPPL2P10696 532 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 MSNP26038 577 aaKnown RBP16.69■□□□□ 0.26
SNCA-209ENST00000506244 CD68P34810 354 aaPredicted RBP16.69■□□□□ 0.26
SNCA-209ENST00000506244 BLKP51451 505 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 MPP3Q13368 585 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 GALNT3Q14435 633 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 IHHQ14623 411 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 INPP5AQ14642 412 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 NFATC4Q14934 902 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 SHBQ15464 509 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 TRIP6Q15654 476 aaKnown RBP16.69■□□□□ 0.26
SNCA-209ENST00000506244 QPCTQ16769 361 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 CRTC1Q6UUV9 634 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 ZNF765Q7L2R6 523 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 TSPAN33Q86UF1 283 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 GATAD2AQ86YP4 633 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 NRSN1Q8IZ57 195 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 SPATA22Q8NHS9 363 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 BAHD1Q8TBE0 780 aaPredicted RBP16.69■□□□□ 0.26
SNCA-209ENST00000506244 LRRC45Q96CN5 670 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 TBATAQ96M53 351 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 TRIB3Q96RU7 358 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 APOOQ9BUR5 198 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 FSD1LQ9BXM9 530 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 FTSJ1Q9UET6 329 aa16.69■□□□□ 0.26
SNCA-209ENST00000506244 COL5A1P20908 1838 aaPredicted RBP16.68■□□□□ 0.26
SNCA-209ENST00000506244 GOLGA6CA6NDK9 693 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 GOLGA6BA6NDN3 693 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 NEMP2A6NFY4 417 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 PMPCBO75439 489 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 PIAS2O75928 621 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 MT-CYBP00156 380 aaPredicted RBP16.68■□□□□ 0.26
SNCA-209ENST00000506244 EPOP01588 193 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 GOLGA6DP0CG33 693 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 GM2AP17900 193 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 TEAD1P28347 426 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 ETV3P41162 512 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 STC1P52823 247 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 GEMP55040 296 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 SIM1P81133 766 aaPredicted RBP16.68■□□□□ 0.26
SNCA-209ENST00000506244 PRPSAP1Q14558 356 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 HSD11B1LQ7Z5J1 315 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 GLRX5Q86SX6 157 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 WDR92Q96MX6 357 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 SPATA13Q96N96 652 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 CAMK1GQ96NX5 476 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 SLC13A1Q9BZW2 595 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 PHPT1Q9NRX4 125 aaPredicted RBP16.68■□□□□ 0.26
SNCA-209ENST00000506244 GOLGA6AQ9NYA3 693 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 PKD2L2Q9NZM6 624 aa16.68■□□□□ 0.26
SNCA-209ENST00000506244 RGSL1A5PLK6 1076 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 GIPC1O14908 333 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 SDC3O75056 442 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 HOXC4P09017 264 aaPredicted RBP16.67■□□□□ 0.26
SNCA-209ENST00000506244 C1SP09871 688 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 JUNDP17535 347 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 HLA-DPA1P20036 260 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 DGKAP23743 735 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 WNT3AP56704 352 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 PPARDQ03181 441 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 DPTQ07507 201 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 GSE1Q14687 1217 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 ANKRD20A2Q5SQ80 823 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 ANKRD20A1Q5TYW2 823 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 ANKRD20A3Q5VUR7 823 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 RAET1GQ6H3X3 334 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 PNCKQ6P2M8 343 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 Q6ZVL8 140 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 SLC13A5Q86YT5 568 aaPredicted RBP16.67■□□□□ 0.26
SNCA-209ENST00000506244 PHACTR4Q8IZ21 702 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 CBARPQ8N350 705 aaPredicted RBP16.67■□□□□ 0.26
SNCA-209ENST00000506244 MAIP1Q8WWC4 291 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 FAM118BQ9BPY3 351 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 CDH19Q9H159 772 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 MAGEE1Q9HCI5 957 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 RAD18Q9NS91 495 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 SPASTQ9UBP0 616 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 KLQ9UEF7 1012 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 APOBEC3BQ9UH17 382 aaKnown RBP16.67■□□□□ 0.26
SNCA-209ENST00000506244 APOBEC2Q9Y235 224 aaKnown RBP16.67■□□□□ 0.26
SNCA-209ENST00000506244 BTBD3Q9Y2F9 522 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 AAR2Q9Y312 384 aaKnown RBP16.67■□□□□ 0.26
SNCA-209ENST00000506244 OR1A2Q9Y585 309 aa16.67■□□□□ 0.26
SNCA-209ENST00000506244 TNFSF14O43557 240 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 TRIM16O95361 564 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 ADRB1P08588 477 aa16.66■□□□□ 0.26
SNCA-209ENST00000506244 MYCLP1P12525 358 aaPredicted RBP16.66■□□□□ 0.26
SNCA-209ENST00000506244 TRIM23P36406 574 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms