RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 TIPRLO75663 272 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 SOAT2O75908 522 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 PAPSS2O95340 614 aaPredicted RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 GOT2P00505 430 aaKnown RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 C8BP07358 591 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 LINC00032P0C843 101 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 RHOQP17081 205 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 PSMD8P48556 350 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 FOXA1P55317 472 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 MGAT3Q09327 533 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 GALNT1Q10472 559 aaPredicted RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 BIRC2Q13490 618 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 IRF5Q13568 498 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 OR4D1Q15615 310 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 SLC14A2Q15849 920 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 MYLK3Q32MK0 819 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 UGT3A2Q3SY77 523 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 VPS26BQ4G0F5 336 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 SAMD4BQ5PRF9 694 aaKnown RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 C6orf10Q5SRN2 563 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 FBXL22Q6P050 247 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 ZNF549Q6P9A3 640 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 FUNDC1Q8IVP5 155 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 CLYBLQ8N0X4 340 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 PTGR2Q8N8N7 351 aaPredicted RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 FAM110BQ8TC76 370 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 DNAJC1Q96KC8 554 aaKnown RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 NSUN5Q96P11 429 aaKnown RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 RPRD1AQ96P16 312 aaPredicted RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 KCNA7Q96RP8 456 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 RANBP9Q96S59 729 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 SEMA3CQ99985 751 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 TMEM79Q9BSE2 394 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 MRGBPQ9NV56 204 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 DDX18Q9NVP1 670 aaKnown RBP7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 GMIPQ9P107 970 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 TMEM181Q9P2C4 612 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 CD300AQ9UGN4 299 aa7.63□□□□□ -1.19
PPARGC1A-204ENST00000506055 A0A0J9YYE9 177 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 WASH4PA8MWX3 477 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 B4GALT3O60512 393 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 STAMBPO95630 424 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CAPNS1P04632 268 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 PRSS56P0CW18 603 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 GFAPP14136 432 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CD1DP15813 335 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CKMT2P17540 419 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 SLC7A1P30825 629 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 OR1E1P30953 314 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 SOX11P35716 441 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 ACVRL1P37023 503 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 INHBCP55103 352 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 ARPP19P56211 112 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TRAP1Q12931 704 aaKnown RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 IKBKEQ14164 716 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 GRB7Q14451 532 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 SEMA3AQ14563 771 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 LPIN1Q14693 890 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 RETREG3Q86VR2 466 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TTC9BQ8N6N2 239 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 ATAD1Q8NBU5 361 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 OR13C4Q8NGS5 318 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 ARRDC2Q8TBH0 407 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 GRIN3AQ8TCU5 1115 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TRPC4APQ8TEL6 797 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CANT1Q8WVQ1 401 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 PBXIP1Q96AQ6 731 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 L3HYPDHQ96EM0 354 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 SLC39A13Q96H72 371 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TRMOQ9BU70 441 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TRIM8Q9BZR9 551 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 ZNF696Q9H7X3 374 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 PRDM5Q9NQX1 630 aaPredicted RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 POLR3BQ9NW08 1133 aaPredicted RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TMEM248Q9NWD8 314 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 EGFL7Q9UHF1 273 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 SARDHQ9UL12 918 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 AURKCQ9UQB9 309 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 SCML2Q9UQR0 700 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 UBA6A0AVT1 1052 aaPredicted RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CCDC162PA2VCL2 907 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 H3BMM5 538 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 H3BSA7 217 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 PIP5K1BO14986 540 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 KPNA6O60684 536 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 RAMP2O60895 175 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CDK14O94921 469 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 ATXN1LP0C7T5 689 aaKnown RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 HSPA8P11142 646 aaKnown RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 GPX3P22352 226 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 OR1G1P47890 313 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 TIAL1Q01085 375 aaKnown RBP eCLIP7.62□□□□□ -1.193e-6■■□□□ 11.7
PPARGC1A-204ENST00000506055 NRG1Q02297 640 aaPredicted RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 CAPRIN1Q14444 709 aaKnown RBP7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 RPS6KA2Q15349 733 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 C10orf120Q5SQS8 335 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 FAM45BPQ6NSW5 357 aa7.62□□□□□ -1.19
PPARGC1A-204ENST00000506055 HMBOX1Q6NT76 420 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms