RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 K7ERQ8 282 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 STX7O15400 261 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 SMAD6O43541 496 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 SNNO75324 88 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 H2AFYO75367 372 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 KLHL2O95198 593 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 POP4O95707 220 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 SERPINE1P05121 402 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PRKCGP05129 697 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 SRCP12931 536 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TYRP14679 529 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 GRK2P25098 689 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 HLA-FP30511 346 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 SLC8A1P32418 973 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ABCG1P45844 678 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 NRIP1P48552 1158 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PTPN5P54829 565 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TAS2R39P59534 338 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 BST1Q10588 318 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 KCNC3Q14003 757 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 COL19A1Q14993 1142 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 DLG2Q15700 870 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 CHI3L2Q15782 390 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TYSND1Q2T9J0 566 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 MYLK3Q32MK0 819 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 LACTB2Q53H82 288 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 CARD16Q5EG05 197 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TCEAL5Q5H9L2 206 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 DGKKQ5KSL6 1271 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ATXN7L2Q5T6C5 722 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 RNF187Q5TA31 235 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 HECTD2Q5U5R9 776 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 CNSTQ6PJW8 725 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TRPM8Q7Z2W7 1104 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PLD6Q8N2A8 252 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TTC30BQ8N4P2 665 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 GBP7Q8N8V2 638 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 GPATCH11Q8N954 259 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ACVR1CQ8NER5 493 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 VN1R2Q8NFZ6 395 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 OR4K2Q8NGD2 314 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 OR13C4Q8NGS5 318 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PPP1R14CQ8TAE6 165 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TTC8Q8TAM2 541 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 RIN3Q8TB24 985 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ITFG1Q8TB96 612 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 WFIKKN2Q8TEU8 576 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PDCD6IPQ8WUM4 868 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 CCT6BQ92526 530 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ATXN7L3BQ96GX2 97 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 MYO19Q96H55 970 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ZSWIM3Q96MP5 696 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 OMDQ99983 421 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 ATP13A3Q9H7F0 1226 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 CAB39LQ9H9S4 337 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 NMRAL1Q9HBL8 299 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 CATSPERZQ9NTU4 200 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 INTS10Q9NVR2 710 aaKnown RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 THAP1Q9NVV9 213 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 COPG2Q9UBF2 871 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
COL4A5-208ENST00000505728 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 PCDHB9Q9Y5E1 797 aa8.06□□□□□ -1.12
COL4A5-208ENST00000505728 TMEM114B3SHH9 223 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 TRAFD1O14545 582 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 PHGDHO43175 533 aaKnown RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 HOXC11O43248 304 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 TRIM13O60858 407 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 ZNF821O75541 412 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 ASLP04424 464 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 SRPRAP08240 638 aaKnown RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 F7P08709 466 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 RBP1P09455 135 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 LTA4HP09960 611 aaKnown RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 CISD3P0C7P0 127 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 PIRTP0C851 137 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 SLC35E2BP0CK96 405 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 FGF3P11487 239 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 POLR2EP19388 210 aaKnown RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 SAT1P21673 171 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 CD9P21926 228 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 FSHRP23945 695 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 PMLP29590 882 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 SERPINA4P29622 427 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 HMGCLP35914 325 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 LTBRP36941 435 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 PPARGP37231 505 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 NNMTP40261 264 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 ABL2P42684 1182 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 STC1P52823 247 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 CORO7P57737 925 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 IRX4P78413 519 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 OCRLQ01968 901 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 CCDC15Q0P6D6 951 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 ASPHQ12797 758 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 PTPRCAPQ14761 206 aa8.05□□□□□ -1.12
COL4A5-208ENST00000505728 CBX2Q14781 532 aaPredicted RBP8.05□□□□□ -1.12
COL4A5-208ENST00000505728 PCLAFQ15004 111 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms