RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SMIM24O75264 130 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 PYGLP06737 847 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 PPARGP37231 505 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 CLCN4P51793 760 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 COPAP53621 1224 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 ADARP55265 1226 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 ATP6V0D1P61421 351 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 LPCAT1Q8NF37 534 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 WBP2Q969T9 261 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 L3HYPDHQ96EM0 354 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 ALG14Q96F25 216 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 LRRC3Q9BY71 257 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 TFB2MQ9H5Q4 396 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 RNPEPL1Q9HAU8 725 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 MAGEE1Q9HCI5 957 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 TAS2R13Q9NYV9 303 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 NOP53Q9NZM5 478 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZMYM5Q9UJ78 669 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 NDUFS3O75489 264 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 CD160O95971 181 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 CYBBP04839 570 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 CKMP06732 381 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 TPBGLP0DKB5 382 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 PGM1P36871 562 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 PLK1P53350 603 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 TXNDC8Q6A555 127 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 RAB44Q7Z6P3 723 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 ENDOVQ8N8Q3 282 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 TXNDC5Q8NBS9 432 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 ASAH2Q9NR71 780 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 VPS51Q9UID3 782 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
TRAPPC11-204ENST00000505676 STX7O15400 261 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 FZD6O60353 706 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 GJB3O75712 270 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 C8AP07357 584 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 CSKP41240 450 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 CDKN2DP55273 166 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 USP4Q13107 963 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 PDAP1Q13442 181 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 ATG14Q6ZNE5 492 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 CPSF7Q8N684 471 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 LEMD2Q8NC56 503 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 OR4K2Q8NGD2 314 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 FIBINQ8TAL6 211 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 AGAP11Q8TF27 550 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 AUTS2Q8WXX7 1259 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARHGAP26Q9UNA1 814 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 SPO11Q9Y5K1 396 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 OBSL1O75147 1896 aa17.27■□□□□ 0.36
TRAPPC11-204ENST00000505676 A8MT66 165 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 CIB2O75838 187 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 CXCL14O95715 111 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZNF37AP17032 561 aaPredicted RBP17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 IMPDH1P20839 514 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 MPSTP25325 297 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 ITGB8P26012 769 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 MZF1P28698 734 aaPredicted RBP17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 HERC3Q15034 1050 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 ARMC12Q5T9G4 340 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 CERS6Q6ZMG9 384 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 GAREM2Q75VX8 874 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 NKAPQ8N5F7 415 aaKnown RBP17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 KREMEN2Q8NCW0 462 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 LPGAT1Q92604 370 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 PKP3Q9Y446 797 aa17.27■□□□□ 0.35
TRAPPC11-204ENST00000505676 OR51F1A6NGY5 319 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 SNAP91O60641 907 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 TM7SF2O76062 418 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 FGBP02675 491 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 CHRNGP07510 517 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 IRX1P78414 480 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 TRAF2Q12933 501 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 UBAP2LQ14157 1087 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 TRMT5Q32P41 509 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 WLSQ5T9L3 541 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 LSMEM2Q8N112 164 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 CCNYL1Q8N7R7 359 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 RBM15BQ8NDT2 890 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 MDGA1Q8NFP4 955 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 DDI1Q8WTU0 396 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 SLC22A12Q96S37 553 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 CYP2S1Q96SQ9 504 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 TTC1Q99614 292 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 TACO1Q9BSH4 297 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 DERL2Q9GZP9 239 aa17.26■□□□□ 0.35
TRAPPC11-204ENST00000505676 LCHNA4D1U4 455 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 GLUD1P00367 558 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 CD1DP15813 335 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 NCF2P19878 526 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 EPHB1P54762 984 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 MXRA7P84157 204 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 KDSRQ06136 332 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 UGT3A1Q6NUS8 523 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZNF549Q6P9A3 640 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 FRMD7Q6ZUT3 714 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 NET1Q7Z628 596 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 ISCA2Q86U28 154 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms