RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TC2NQ8N9U0 490 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 RASSF8Q8NHQ8 419 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 PTPMT1Q8WUK0 201 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC9A6Q92581 669 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCDC47Q96A33 483 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 OTULINQ96BN8 352 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 RNF183Q96D59 192 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 HDAC11Q96DB2 347 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLITRK1Q96PX8 696 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 FCRL5Q96RD9 977 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 GAD1Q99259 594 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 MACROD1Q9BQ69 325 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 MXRA8Q9BRK3 442 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 MMP27Q9H306 513 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 TRPV4Q9HBA0 871 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 MAGEE1Q9HCI5 957 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 MBNL1Q9NR56 388 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 CWC15Q9P013 229 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 SH3BP4Q9P0V3 963 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 PLAGL1Q9UM63 463 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 R3HDM2Q9Y2K5 976 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 A0A0A0MQY5 61 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 TRAV34A0A0B4J273 112 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 A0A1B0GVM2 712 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ARHGEF37A1IGU5 675 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 GTPBP10A4D1E9 387 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 DPPA5A6NC42 116 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 AKR1B15C9JRZ8 316 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 KLRF2D3W0D1 207 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 IFNL4K9M1U5 179 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 PSMD14O00487 310 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 RRHO14718 337 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 OGG1O15527 345 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 PRPF4O43172 522 aaKnown RBP eCLIP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 JRKO75564 520 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 JTBO76095 146 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 GOSR1O95249 250 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ESRRBO95718 433 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 CHRM5P08912 532 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 MMP9P14780 707 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ST6GAL1P15907 406 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 TFEBP19484 476 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ANXA7P20073 488 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 HOXC8P31273 242 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 TLX1P31314 330 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 HNF4AP41235 474 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ARSEP51690 589 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 CLCN3P51790 818 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 TAS2R40P59535 323 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ITGADQ13349 1161 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 IL11RAQ14626 422 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 HYAL4Q2M3T9 481 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 SYTL3Q4VX76 610 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 KIAA1755Q5JYT7 1200 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 RARS2Q5T160 578 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ARMC4Q5T2S8 1044 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 CAVIN1Q6NZI2 390 aaKnown RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 PLBD1Q6P4A8 553 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 TRAT1Q6PIZ9 186 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 LCTLQ6UWM7 567 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ADCK2Q7Z695 626 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 GRASPQ7Z6J2 395 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZDHHC23Q8IYP9 409 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 MMP21Q8N119 569 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 DPP10Q8N608 796 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 XXYLT1Q8NBI6 393 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 HJURPQ8NCD3 748 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 MGARPQ8TDB4 240 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 ATOH1Q92858 354 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 CAVIN3Q969G5 261 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 FBXL8Q96CD0 374 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCDC114Q96M63 670 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 BBC3Q96PG8 261 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 NUDCD1Q96RS6 583 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 C1QTNF5Q9BXJ0 243 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 POMT1Q9Y6A1 747 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 CEPT1Q9Y6K0 416 aa3.96□□□□□ -1.77
TRAPPC13-208ENST00000505553 GPRASP1Q5JY77 1395 aa3.96□□□□□ -1.78
TRAPPC13-208ENST00000505553 CYP2D7A0A087X1C5 515 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 HSPB2A8KAH6 182 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 HTATSF1O43719 755 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 RNF8O76064 485 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 ETFAP13804 333 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CTPS1P17812 591 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 TCEA1P23193 301 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SHMT1P34896 483 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MPLP40238 635 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 PRCPP42785 496 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CCR10P46092 362 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 POLGP54098 1239 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC12A2P55011 1212 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SOX10P56693 466 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MRPS34P82930 218 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 GRIK3Q13003 919 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SMC1AQ14683 1233 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLMAPQ14BN4 828 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 HSPB2Q16082 182 aa3.95□□□□□ -1.78
TRAPPC13-208ENST00000505553 MMEL1Q495T6 779 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms