RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 LRP4O75096 1905 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 ERCC2P18074 760 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 BCL2L1Q07817 233 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 INPP5AQ14642 412 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 WSCD2Q2TBF2 565 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 HIST2H2BCQ6DN03 193 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 PLEKHA7Q6IQ23 1121 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 SRLQ86TD4 932 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 ATCAYQ86WG3 371 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 GKN2Q86XP6 184 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 Q8N9G6 341 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 TSEN2Q8NCE0 465 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 ATL2Q8NHH9 583 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 ZNF641Q96N77 438 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 CATSPER2Q96P56 530 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 TUBGCP5Q96RT8 1024 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 PEBP4Q96S96 227 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 EDEM3Q9BZQ6 932 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 TRIM7Q9C029 511 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 AKAP7Q9P0M2 348 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 KLQ9UEF7 1012 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 PLEKHB1Q9UF11 243 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 OR1A2Q9Y585 309 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 SCINQ9Y6U3 715 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 CREBBPQ92793 2442 aa16.08■□□□□ 0.16
PDLIM7-213ENST00000505074 SPTBN1Q01082 2364 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 TSPAN11A1L157 253 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 TMEM110-MUSTN1A8MSY1 372 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 EIF3CLB5ME19 914 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 BUB1BO60566 1050 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 RASGRP1O95267 797 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 FTLP02792 175 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 MIPP30301 263 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 MMP12P39900 470 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 RGRP47804 291 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 HK3P52790 923 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 NFATC4Q14934 902 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 ALG11Q2TAA5 492 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 PHF19Q5T6S3 580 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 C9orf43Q8TAL5 461 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 HCAR2Q8TDS4 363 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 EIF3CQ99613 913 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 APOOQ9BUR5 198 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 ZNF71Q9NQZ8 489 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 APPL1Q9UKG1 709 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 RNF215Q9Y6U7 377 aa16.07■□□□□ 0.16
PDLIM7-213ENST00000505074 TEP1Q99973 2627 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 TMEM191CA6NGB0 347 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 ELFN1P0C7U0 828 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 PEX5P50542 639 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 SCNN1BP51168 640 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 SRP54P61011 504 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 ZNF235Q14590 738 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 ARHGAP36Q6ZRI8 547 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 ZNF571Q7Z3V5 609 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 ZSWIM9Q86XI8 627 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 IL22RA1Q8N6P7 574 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 NPWQ8N729 165 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 GPBAR1Q8TDU6 330 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 NKD1Q969G9 470 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 TRIM11Q96F44 468 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 WDR92Q96MX6 357 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 SYT11Q9BT88 431 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 MOSPD1Q9UJG1 213 aa16.06■□□□□ 0.16
PDLIM7-213ENST00000505074 A8MX80 341 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 H3BRJ5 948 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 CACNB4O00305 520 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 SERPINC1P01008 464 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 TNFP01375 233 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 SKILP12757 684 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 PNLIPP16233 465 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 GLB1P16278 677 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 ARL4AP40617 200 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 POLR2LP62875 67 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 IL10RBQ08334 325 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 MTM1Q13496 603 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 RFTN1Q14699 578 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 SMTNL2Q2TAL5 461 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 TDRD12Q587J7 1177 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 E4F1Q66K89 784 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 ARHGAP12Q8IWW6 846 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 ARFGAP1Q8N6T3 406 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 PDCD6IPQ8WUM4 868 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 HSPH1Q92598 858 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 MIB2Q96AX9 1013 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 CDH19Q9H159 772 aa16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 MRPL47Q9HD33 250 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-213ENST00000505074 CACNA1DQ01668 2161 aa16.04■□□□□ 0.16
PDLIM7-213ENST00000505074 ZNF891A8MT65 544 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-213ENST00000505074 DDX3XO00571 662 aaKnown RBP eCLIP16.04■□□□□ 0.161e-16■■■□□ 15.4
PDLIM7-213ENST00000505074 LRCH4O75427 683 aa16.04■□□□□ 0.16
PDLIM7-213ENST00000505074 RECQL5O94762 991 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms