RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 DUSP10Q9Y6W6 482 aa14.27□□□□□ -0.13
HOXC9-202ENST00000504557 KIF26BQ2KJY2 2108 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 USP24Q9UPU5 2620 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 TMEM202A6NGA9 273 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 TOR1BO14657 336 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 PPP1R12AO14974 1030 aaPredicted RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 CA4P22748 312 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ACP1P24666 158 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 CDKN2BP42772 138 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 PEX5P50542 639 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 HK3P52790 923 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 TCEAL1Q15170 157 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 SMAD1Q15797 465 aaKnown RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 LRRC66Q68CR7 880 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ZCCHC8Q6NZY4 707 aaKnown RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 PNCKQ6P2M8 343 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 DOK6Q6PKX4 331 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ZC3H18Q86VM9 953 aaKnown RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ARRDC2Q8TBH0 407 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 IFI44Q8TCB0 444 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 OR1E3Q8WZA6 343 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 KRT35Q92764 455 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 SCRN2Q96FV2 425 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 RBM15Q96T37 977 aaKnown RBP eCLIP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 BAG1Q99933 345 aaPredicted RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 HEMGNQ9BXL5 484 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 TDRD1Q9BXT4 1180 aaKnown RBP14.26□□□□□ -0.13
HOXC9-202ENST00000504557 ABCG4Q9H172 646 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 WDR26Q9H7D7 661 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
HOXC9-202ENST00000504557 A0A0J9YYE9 177 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 MACROD2A1Z1Q3 448 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CFAP69A5D8W1 941 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 FAM221BA6H8Z2 402 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 TRABD2BA6NFA1 517 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 YY2O15391 372 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 TNFP01375 233 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 TRBC1P01850 177 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 C1SP09871 688 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CKMT1AP12532 417 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 BLKP51451 505 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 HADHBP55084 474 aaKnown RBP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 INSM1Q01101 510 aaPredicted RBP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 ADCY2Q08462 1091 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 TARDBPQ13148 414 aaKnown RBP eCLIP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 TFDP2Q14188 446 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 GALNT3Q14435 633 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 AGERQ15109 404 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 NR0B2Q15466 257 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CCDC181Q5TID7 509 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 C11orf63Q6NUN7 778 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 ESRP1Q6NXG1 681 aaKnown RBP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 GUSBP11Q6P575 273 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 EFL1Q7Z2Z2 1120 aaKnown RBP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 TMPRSS12Q86WS5 348 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 HEATR4Q86WZ0 1026 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CNTD1Q8N815 330 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 OR56A4Q8NGH8 313 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 DTD2Q96FN9 168 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CCDC86Q9H6F5 360 aaKnown RBP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CYP4F12Q9HCS2 524 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 FGF22Q9HCT0 170 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 EVA1BQ9NVM1 165 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 UBP1Q9NZI7 540 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 REXO2Q9Y3B8 237 aaKnown RBP14.25□□□□□ -0.13
HOXC9-202ENST00000504557 CSNK1G3Q9Y6M4 447 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 UNC13CQ8NB66 2214 aa14.25□□□□□ -0.13
HOXC9-202ENST00000504557 A0A0A6YYK5 440 aaPredicted RBP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 LY6G6EA0A0G2JKS1 128 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 ZNF487B1APH4 448 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 FZD6O60353 706 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 ZRANB2O95218 330 aaKnown RBP eCLIP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 CLDN7O95471 211 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 MMP2P08253 660 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 PIRTP0C851 137 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 CES1P23141 567 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 GPR1P46091 355 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 DUSP3P51452 185 aaPredicted RBP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 KIAA1024LP59773 190 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 IFI35P80217 286 aaPredicted RBP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 SKOR1P84550 965 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 CYP4F3Q08477 520 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 ELOCQ15369 112 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 TFDP3Q5H9I0 405 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 TAF8Q7Z7C8 310 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 TRIM74Q86UV6 250 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 VSIG1Q86XK7 387 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 SLC35F3Q8IY50 421 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 KATNAL2Q8IYT4 538 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 RCOR2Q8IZ40 523 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 FSTL5Q8N475 847 aaPredicted RBP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 MAPK15Q8TD08 544 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 P3H4Q92791 437 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 GLMNQ92990 594 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms