RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	FAM126B	Q8IXS8	530 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	FBXO22	Q8NEZ5	403 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	SPDL1	Q96EA4	605 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	CDKN2AIPNL	Q96HQ2	116 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	CATSPERZ	Q9NTU4	200 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	UTP6	Q9NYH9	597 aa	Known RBP	13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	LRFN2	Q9ULH4	789 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	FIS1	Q9Y3D6	152 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	TRAF6	Q9Y4K3	522 aa		13.05	□□□□□ -0.32
MATR3-233	ENST00000504203	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	CCDC189	A1A4V9	331 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	MAGEA13P	A6NCF6	341 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	KDELR3	O43731	214 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SLC4A1	P02730	911 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PEX2	P28328	305 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SLC11A2	P49281	568 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	ZNF140	P52738	457 aa	Predicted RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	RPS24	P62847	133 aa	Known RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	HERVK_113	P63132	956 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	XIAP	P98170	497 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	ART3	Q13508	389 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PTK2B	Q14289	1009 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PPP1R3A	Q16821	1122 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SFT2D3	Q587I9	215 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	IL31	Q6EBC2	164 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	KLHDC10	Q6PID8	442 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	BBS5	Q8N3I7	341 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	GDPD5	Q8WTR4	605 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SEPT8	Q92599	483 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PPP2R3C	Q969Q6	453 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	NPAS2	Q99743	824 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	AARSD1	Q9BTE6	412 aa	Known RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	ERVK-6	Q9BXR3	956 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	MRPL9	Q9BYD2	267 aa	Known RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	KLHL4	Q9C0H6	718 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	NLE1	Q9NVX2	485 aa	Predicted RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	DLGAP2	Q9P1A6	1054 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PSMD13	Q9UNM6	376 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SPO11	Q9Y5K1	396 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	ZNF840P	A6NDX5	716 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	HOXA2	O43364	376 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PEX1	O43933	1283 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SUPT7L	O94864	414 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PRL	P01236	227 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	KLKB1	P03952	638 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	MTHFD2	P13995	350 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	PKNOX1	P55347	436 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	MS4A2	Q01362	244 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SQLE	Q14534	574 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	UGT3A2	Q3SY77	523 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	OR52E8	Q6IFG1	317 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	GK5	Q6ZS86	529 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	RHEBL1	Q8TAI7	183 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	OVCA2	Q8WZ82	227 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	VCX	Q9H320	206 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	VCX3B	Q9H321	246 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	EBF3	Q9H4W6	596 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	HMX1	Q9NP08	348 aa	Predicted RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	MTRR	Q9UBK8	725 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	UBA2	Q9UBT2	640 aa	Predicted RBP	13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	SCOC	Q9UIL1	159 aa		13.04	□□□□□ -0.32
MATR3-233	ENST00000504203	ANKRD36	A6QL64	1941 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	TBKBP1	A7MCY6	615 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	STX16-NPEPL1	H3BU86	382 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	UBD	O15205	165 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	CFLAR	O15519	480 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	COCH	O43405	550 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	CLDN11	O75508	207 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	TRPA1	O75762	1119 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	UPP2	O95045	317 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	ME2	P23368	584 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	PAX7	P23759	505 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	PSMD8	P48556	350 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	OR4D1	Q15615	310 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	LRRC36	Q1X8D7	754 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	SETMAR	Q53H47	684 aa	Predicted RBP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	FAM219B	Q5XKK7	198 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	DENND1C	Q8IV53	801 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	APLF	Q8IW19	511 aa	Predicted RBP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	PDZD8	Q8NEN9	1154 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	ATOH8	Q96SQ7	321 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	CINP	Q9BW66	212 aa	Predicted RBP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	CFHR5	Q9BXR6	569 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	TRPC7	Q9HCX4	862 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	INTS10	Q9NVR2	710 aa	Known RBP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	MED16	Q9Y2X0	877 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	ILVBL	A1L0T0	632 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203		H3BMM5	538 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	ACOT8	O14734	319 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	INSIG1	O15503	277 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	SMIM24	O75264	130 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	CRTAM	O95727	393 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	PRSS56	P0CW18	603 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	HMGA1	P17096	107 aa	Known RBP	13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	SGSH	P51688	502 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	OXCT1	P55809	520 aa		13.03	□□□□□ -0.32
MATR3-233	ENST00000504203	FLOT2	Q14254	428 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms