RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 CPOXP36551 454 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 CCR9P51686 369 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 RARSP54136 660 aaKnown RBP4.12□□□□□ -1.75
SUB1-204ENST00000504016 TMEM115Q12893 351 aaPredicted RBP4.12□□□□□ -1.75
SUB1-204ENST00000504016 TBX2Q13207 712 aaPredicted RBP4.12□□□□□ -1.75
SUB1-204ENST00000504016 NAE1Q13564 534 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 FGFBP1Q14512 234 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 TBCEQ15813 527 aaPredicted RBP4.12□□□□□ -1.75
SUB1-204ENST00000504016 GSTA3Q16772 222 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 ALG11Q2TAA5 492 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 WBP2NLQ6ICG8 309 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 WDR73Q6P4I2 378 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 TSSK4Q6SA08 328 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 KLHL24Q6TFL4 600 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 SLC36A4Q6YBV0 504 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 QSOX2Q6ZRP7 698 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 PCYOX1LQ8NBM8 494 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 FAM216AQ8WUB2 273 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 GTF3C6Q969F1 213 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 SCMH1Q96GD3 660 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 PPM1MQ96MI6 270 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 KXD1Q9BQD3 176 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 PDCL3Q9H2J4 239 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 PLEKHA4Q9H4M7 779 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 DDX31Q9H8H2 851 aaKnown RBP4.12□□□□□ -1.75
SUB1-204ENST00000504016 TAS2R10Q9NYW0 307 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 INTS6Q9UL03 887 aaKnown RBP4.12□□□□□ -1.75
SUB1-204ENST00000504016 KCNS2Q9ULS6 477 aa4.12□□□□□ -1.75
SUB1-204ENST00000504016 TMEM202A6NGA9 273 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 EIF3CLB5ME19 914 aaKnown RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 NTN3O00634 580 aaPredicted RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 SOCS6O14544 535 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 EPB41L2O43491 1005 aaKnown RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 NDUFS7O75251 213 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 KRT36O76013 467 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 HNRNPH1P31943 449 aaKnown RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 PBX3P40426 434 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 DLX5P56178 289 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 CDC73Q6P1J9 531 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 MTSS1LQ765P7 747 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 DIS3L2Q8IYB7 885 aaKnown RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 DSELQ8IZU8 1212 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 SCCPDHQ8NBX0 429 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 AGBL3Q8NEM8 1001 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 MTBPQ96DY7 904 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 PERPQ96FX8 193 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 IGSF21Q96ID5 467 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 C3orf30Q96M34 536 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 NR1H4Q96RI1 486 aaPredicted RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 IL25Q9H293 177 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 KCNN2Q9H2S1 579 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 TCF7L2Q9NQB0 619 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 CNGB3Q9NQW8 809 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 AASSQ9UDR5 926 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 PGAP2Q9UHJ9 254 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 SLC45A1Q9Y2W3 748 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 AAR2Q9Y312 384 aaKnown RBP4.11□□□□□ -1.75
SUB1-204ENST00000504016 CEPT1Q9Y6K0 416 aa4.11□□□□□ -1.75
SUB1-204ENST00000504016 NPIPB15A6NHN6 443 aaPredicted RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 USP17L23D6RBM5 183 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 KDM4BO94953 1096 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 NKX2-2O95096 273 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 MBD4O95243 580 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 CLDN14O95500 239 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 PIP4K2AP48426 406 aaPredicted RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 EIF3BP55884 814 aaKnown RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 TUBA1BP68363 451 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 MPP1Q00013 466 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 CEBPZQ03701 1054 aaKnown RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 KRT32Q14532 448 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 KRTAP24-1Q3LI83 254 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 HAUS3Q68CZ6 603 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 BEST2Q8NFU1 509 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 LILRB1Q8NHL6 650 aaPredicted RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 HMGCLL1Q8TB92 370 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 PSPC1Q8WXF1 523 aaKnown RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 WDFY2Q96P53 400 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 RANBP17Q9H2T7 1088 aaKnown RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 ESRP2Q9H6T0 727 aaKnown RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 LRRC4Q9HBW1 653 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 MKKSQ9NPJ1 570 aaPredicted RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 CNOT8Q9UFF9 292 aaKnown RBP4.1□□□□□ -1.75
SUB1-204ENST00000504016 SLCO3A1Q9UIG8 710 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 HAO1Q9UJM8 370 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 STON1Q9Y6Q2 735 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 KDM3AQ9Y4C1 1321 aa4.1□□□□□ -1.75
SUB1-204ENST00000504016 A0A0U1RQJ8 604 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 FAM237AA0A1B0GTK4 181 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 FAM237BA0A1B0GVD1 139 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 TTC36A6NLP5 189 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 BUB3O43684 328 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 CGAP01215 116 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 PEX5P50542 639 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
SUB1-204ENST00000504016 RPS3AP61247 264 aaKnown RBP4.09□□□□□ -1.75
SUB1-204ENST00000504016 DRAP1Q14919 205 aaPredicted RBP4.09□□□□□ -1.75
SUB1-204ENST00000504016 MED22Q15528 200 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms