RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TMEM202A6NGA9 273 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 TMX2-CTNND1H3BSU7 103 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 MATN3O15232 486 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 PROSCO94903 275 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 PGLSO95336 258 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 CD48P09326 243 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 MX2P20592 715 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 VIPR1P32241 457 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 GARSP41250 739 aaKnown RBP11.97□□□□□ -0.49
MED28-203ENST00000503945 ARSEP51690 589 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 GABREP78334 506 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 CFHR1Q03591 330 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 TRIM14Q14142 442 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 DPYSL3Q14195 570 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 PAFAH1B3Q15102 231 aaKnown RBP11.97□□□□□ -0.49
MED28-203ENST00000503945 TCEA2Q15560 299 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 IFI16Q16666 785 aaKnown RBP11.97□□□□□ -0.49
MED28-203ENST00000503945 CRTC1Q6UUV9 634 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 CBARPQ8N350 705 aaPredicted RBP11.97□□□□□ -0.49
MED28-203ENST00000503945 TEX26Q8N6G2 289 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 COL26A1Q96A83 441 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 CCDC42Q96M95 316 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 COQ10AQ96MF6 247 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 RBM15Q96T37 977 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■■■■ 33.2
MED28-203ENST00000503945 LGMNQ99538 433 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 SEMA3CQ99985 751 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 WDR26Q9H7D7 661 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 CYP4F12Q9HCS2 524 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 PHPT1Q9NRX4 125 aaPredicted RBP11.97□□□□□ -0.49
MED28-203ENST00000503945 RBM22Q9NW64 420 aaKnown RBP eCLIP11.97□□□□□ -0.49
MED28-203ENST00000503945 CHD5Q8TDI0 1954 aa11.97□□□□□ -0.49
MED28-203ENST00000503945 RP1P56715 2156 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 PSMD11O00231 422 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 HEXIM1O94992 359 aaKnown RBP11.96□□□□□ -0.49
MED28-203ENST00000503945 CPP00450 1065 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 CELA2BP08218 269 aaPredicted RBP11.96□□□□□ -0.49
MED28-203ENST00000503945 CCNB1P14635 433 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 GJC1P36383 396 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ARHGAP25P42331 645 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 EPHB1P54762 984 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 KIAA1024LP59773 190 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ERVPABLB-1P60509 514 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 GALNT2Q10471 571 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 SPIDRQ14159 915 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 MESDQ14696 234 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ODF2Q5BJF6 829 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 PERM1Q5SV97 790 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 OGFOD3Q6PK18 319 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 USP45Q70EL2 814 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.96□□□□□ -0.49
MED28-203ENST00000503945 CCNYQ8ND76 341 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ZNF248Q8NDW4 579 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 PCDH19Q8TAB3 1148 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 SLC35G2Q8TBE7 412 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 PIH1D2Q8WWB5 315 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 NUS1Q96E22 293 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ATXN7L3BQ96GX2 97 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 HIC2Q96JB3 615 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 SLC46A1Q96NT5 459 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 TSGA13Q96PP4 275 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 DNAJC7Q99615 494 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ZNF670Q9BS34 389 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 LGR4Q9BXB1 951 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 POLR1EQ9GZS1 481 aaKnown RBP11.96□□□□□ -0.49
MED28-203ENST00000503945 TMEM168Q9H0V1 697 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 DPEP2Q9H4A9 486 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 CPNE5Q9HCH3 593 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 MRPL40Q9NQ50 206 aaKnown RBP11.96□□□□□ -0.49
MED28-203ENST00000503945 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 PPIL1Q9Y3C6 166 aa11.96□□□□□ -0.49
MED28-203ENST00000503945 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 GOLGA6CA6NDK9 693 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 PDHA1P08559 390 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 TMEM253P0C7T8 217 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 GOLGA6DP0CG33 693 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 MYCLP1P12525 358 aaPredicted RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 CTPS1P17812 591 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 GM2AP17900 193 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 CA4P22748 312 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 KDELR1P24390 212 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 ETV3P41162 512 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 PCBP4P57723 403 aaKnown RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 TAS2R40P59535 323 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 TRAF2Q12933 501 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 PEX6Q13608 980 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 CNGA3Q16281 694 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 ASTE1Q2TB18 679 aaPredicted RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 ARHGAP40Q5TG30 622 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 FOXR1Q6PIV2 292 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 Q6ZVL8 140 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 HSD11B1LQ7Z5J1 315 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 ARL14Q8N4G2 192 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 WDR36Q8NI36 951 aaKnown RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 OR1E3Q8WZA6 343 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 FATE1Q969F0 183 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 ZNF830Q96NB3 372 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms