RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 CD1CP29017 333 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 TRIM23P36406 574 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 CASRP41180 1078 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 LIMK2P53671 638 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 FOXK1P85037 733 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 ZNF438Q7Z4V0 828 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 HEATR4Q86WZ0 1026 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 C9orf43Q8TAL5 461 aaPredicted RBP13.03□□□□□ -0.32
TRIO-205ENST00000503399 CDH19Q9H159 772 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 SP110Q9HB58 689 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
TRIO-205ENST00000503399 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
TRIO-205ENST00000503399 TMEM9Q9P0T7 183 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 ANAPC2Q9UJX6 822 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 FZD10Q9ULW2 581 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 PCDHGA3Q9Y5H0 932 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 NBASA2RRP1 2371 aa13.02□□□□□ -0.32
TRIO-205ENST00000503399 LRRK2Q5S007 2527 aa13.02□□□□□ -0.32
TRIO-205ENST00000503399 ANKRD62A6NC57 917 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 ARHGAP42A6NI28 874 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 EFCAB7A8K855 629 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 GM2AP17900 193 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 CR2P20023 1033 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 CSF2RBP32927 897 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 PAPOLAP51003 745 aaKnown RBP13.02□□□□□ -0.33
TRIO-205ENST00000503399 POLR2LP62875 67 aaKnown RBP13.02□□□□□ -0.33
TRIO-205ENST00000503399 PTP4A2Q12974 167 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRIO-205ENST00000503399 NR1D2Q14995 579 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 NCAPHQ15003 741 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 CLPPQ16740 277 aaPredicted RBP13.02□□□□□ -0.33
TRIO-205ENST00000503399 DCAF12Q5T6F0 453 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 AFMIDQ63HM1 303 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 ANKS6Q68DC2 871 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 DNAJC24Q6P3W2 148 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 DOK6Q6PKX4 331 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 C3orf20Q8ND61 904 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 OR4D9Q8NGE8 314 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 KIAA1143Q96AT1 154 aaPredicted RBP13.02□□□□□ -0.33
TRIO-205ENST00000503399 ECHDC3Q96DC8 303 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 CATSPER2Q96P56 530 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 MCEEQ96PE7 176 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 DDA1Q9BW61 102 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 SLC39A8Q9C0K1 460 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 GPN2Q9H9Y4 310 aaPredicted RBP13.02□□□□□ -0.33
TRIO-205ENST00000503399 NLRC4Q9NPP4 1024 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 OCIAD1Q9NX40 245 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 KCNK4Q9NYG8 393 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 TAB2Q9NYJ8 693 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 B4GALT6Q9UBX8 382 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 SUFUQ9UMX1 484 aa13.02□□□□□ -0.33
TRIO-205ENST00000503399 RELNP78509 3460 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 DFFAO00273 331 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 PPM1DO15297 605 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 NKX2-8O15522 239 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 DUX1O43812 170 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 CALB1P05937 261 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 CEACAM5P06731 702 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 THRAP10827 490 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 UNGP13051 313 aaPredicted RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 DESP17661 470 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 SOX5P35711 763 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 GPR3P46089 330 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 CSNK1DP48730 415 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 KLK7P49862 253 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 SCNN1BP51168 640 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 ZNF143P52747 638 aaPredicted RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 NDST2P52849 883 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 POLR2FP61218 127 aaKnown RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 CTBSQ01459 385 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 BECN1Q14457 450 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 SNAP47Q5SQN1 464 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 RAET1GQ6H3X3 334 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 C17orf82Q86X59 251 aaPredicted RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 UNC5BQ8IZJ1 945 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 NAGSQ8N159 534 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 PDCD6IPQ8WUM4 868 aaKnown RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 PTCD2Q8WV60 388 aaKnown RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 AHCYL2Q96HN2 611 aaKnown RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 PCDHB18PQ96TA0 734 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 CTRCQ99895 268 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 FRMD8Q9BZ67 464 aaPredicted RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 GANQ9H2C0 597 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 FAM207AQ9NSI2 230 aaPredicted RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 TRNAU1APQ9NX07 287 aaKnown RBP13.01□□□□□ -0.33
TRIO-205ENST00000503399 DONSONQ9NYP3 566 aa13.01□□□□□ -0.33
TRIO-205ENST00000503399 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
TRIO-205ENST00000503399 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
TRIO-205ENST00000503399 A8MU76 341 aa13□□□□□ -0.33
TRIO-205ENST00000503399 EEF2KO00418 725 aaKnown RBP13□□□□□ -0.33
TRIO-205ENST00000503399 CAPN5O15484 640 aaPredicted RBP13□□□□□ -0.33
TRIO-205ENST00000503399 DAPK3O43293 454 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms