RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 H7C0S8 307 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 PMLP29590 882 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 PRKAA2P54646 552 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 SEMA3AQ14563 771 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 ZNF460Q14592 562 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 SETDB1Q15047 1291 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 LRRC8EQ6NSJ5 796 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 C22orf39Q6P5X5 142 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 ZYG11AQ6WRX3 759 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 ZCCHC23Q6ZST2 131 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 KIAA0907Q7Z7F0 614 aaPredicted RBP22.01■■□□□ 1.11
PTPN13-205ENST00000502971 C12orf76Q8N812 135 aaPredicted RBP22.01■■□□□ 1.11
PTPN13-205ENST00000502971 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.01■■□□□ 1.11
PTPN13-205ENST00000502971 OR6Y1Q8NGX8 325 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 RFWD2Q8NHY2 731 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 PPP2R3CQ969Q6 453 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 SCYL1Q96KG9 808 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 RPL10LQ96L21 214 aaKnown RBP22.01■■□□□ 1.11
PTPN13-205ENST00000502971 GPR78Q96P69 363 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 SMIM14Q96QK8 99 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 C19orf43Q9BQ61 176 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 TNKS2Q9H2K2 1166 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 POLR3BQ9NW08 1133 aaPredicted RBP22.01■■□□□ 1.11
PTPN13-205ENST00000502971 ZNF711Q9Y462 761 aa22.01■■□□□ 1.11
PTPN13-205ENST00000502971 TMEM265A0A087WTH1 108 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 DLDP09622 509 aaKnown RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 MYL2P10916 166 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 SERPINA4P29622 427 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 SLC26A3P40879 764 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 SLC1A6P48664 564 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 STK19P49842 368 aaPredicted RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 ARFIP2P53365 341 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 TMEM151AQ8N4L1 468 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 PCDH20Q8N6Y1 951 aaKnown RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 OR6K2Q8NGY2 324 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 GDPD5Q8WTR4 605 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 NXNL1Q96CM4 212 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 MRPL38Q96DV4 380 aaKnown RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 CDCA3Q99618 268 aaPredicted RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 VPS9D1Q9Y2B5 631 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 TRIM13O60858 407 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 PIGNO95427 931 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 PGGT1BP53609 377 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 ECT2LQ008S8 904 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 KCNC3Q14003 757 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 MYLK3Q32MK0 819 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 GALNTL6Q49A17 601 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 TMC5Q6UXY8 1006 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 FSTL5Q8N475 847 aaPredicted RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 RYBPQ8N488 228 aaPredicted RBP22■■□□□ 1.11
PTPN13-205ENST00000502971 FITM2Q8N6M3 262 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 DZANK1Q9NVP4 752 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 OXSMQ9NWU1 459 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 DCTN4Q9UJW0 460 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 CRYL1Q9Y2S2 319 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 PKP3Q9Y446 797 aa22■■□□□ 1.11
PTPN13-205ENST00000502971 NUP210Q8TEM1 1887 aaPredicted RBP21.99■■□□□ 1.11
PTPN13-205ENST00000502971 PFDN6O15212 129 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 SLC4A1P02730 911 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 HMGCLP35914 325 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 DLG1Q12959 904 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 ITGA9Q13797 1035 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 FAM83EQ2M2I3 478 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 AGAP9Q5VTM2 703 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 AHI1Q8N157 1196 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 MRPL57Q9BQC6 102 aaKnown RBP21.99■■□□□ 1.11
PTPN13-205ENST00000502971 SIKE1Q9BRV8 207 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 CPEB1Q9BZB8 566 aaKnown RBP21.99■■□□□ 1.11
PTPN13-205ENST00000502971 GPR63Q9BZJ6 419 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 C20orf27Q9GZN8 174 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 ZNF576Q9H609 170 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 KCNK13Q9HB14 408 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 POPDC3Q9HBV1 291 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 GPAMQ9HCL2 828 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 IL17CQ9P0M4 197 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 FKBPLQ9UIM3 349 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 MYO7AQ13402 2215 aa21.99■■□□□ 1.11
PTPN13-205ENST00000502971 A0A0J9YYE9 177 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 EPOPA6NHQ4 379 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 TMEM114B3SHH9 223 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 TARM1B6A8C7 271 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 WISP3O95389 354 aaPredicted RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 TRBC1P01850 177 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 LTA4HP09960 611 aaKnown RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 CTPS1P17812 591 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 FDXRP22570 491 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 MC4RP32245 332 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 ABCE1P61221 599 aaKnown RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 CARD16Q5EG05 197 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 ADIPOR2Q86V24 386 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 PPP4R1Q8TF05 950 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 OSCP1Q8WVF1 389 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 LRRC37BQ96QE4 947 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 MRPL46Q9H2W6 279 aaKnown RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 ZNF395Q9H8N7 513 aaPredicted RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 IGSF5Q9NSI5 407 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 DUS2Q9NX74 493 aaKnown RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 KCNK4Q9NYG8 393 aa21.98■■□□□ 1.11
PTPN13-205ENST00000502971 CPSF2Q9P2I0 782 aaKnown RBP21.98■■□□□ 1.11
PTPN13-205ENST00000502971 FBXO10Q9UK96 956 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms