RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZSCAN23Q3MJ62 389 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 BOLA3Q53S33 107 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 MANEAQ5SRI9 462 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 KIAA1614Q5VZ46 1190 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 SPECC1LQ69YQ0 1117 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ALG1LQ6GMV1 187 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 SCYL2Q6P3W7 929 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CRTC1Q6UUV9 634 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ATG14Q6ZNE5 492 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CYP4V2Q6ZWL3 525 aaPredicted RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ZNF765Q7L2R6 523 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TAF8Q7Z7C8 310 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ARHGAP12Q8IWW6 846 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 BBS5Q8N3I7 341 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 EXD3Q8N9H8 876 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PLA2G15Q8NCC3 412 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 DTD2Q96FN9 168 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 EXOC2Q96KP1 924 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CATSPER2Q96P56 530 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TEFMQ96QE5 360 aaKnown RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TAAR9Q96RI9 348 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 NUDCD1Q96RS6 583 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 MGME1Q9BQP7 344 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ZPBPQ9BS86 351 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 EFHD1Q9BUP0 239 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 CINPQ9BW66 212 aaPredicted RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC12A9Q9BXP2 914 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 FRMD8Q9BZ67 464 aaPredicted RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 FAM117AQ9C073 453 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TMEM168Q9H0V1 697 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 DPEP2Q9H4A9 486 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 ZWILCHQ9H900 591 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 MRPL47Q9HD33 250 aaKnown RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 NLRC4Q9NPP4 1024 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 FANCLQ9NW38 375 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 TAB2Q9NYJ8 693 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 RCOR3Q9P2K3 495 aaPredicted RBP6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 IL17BQ9UHF5 180 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 DNPEPQ9ULA0 475 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 AP4E1Q9UPM8 1137 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 COQ6Q9Y2Z9 468 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PCDHGA4Q9Y5G9 962 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 SCINQ9Y6U3 715 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 RNF215Q9Y6U7 377 aa6.11□□□□□ -1.43
LSM3P4-201ENST00000502948 PRAMEF33A0A0G2JMD5 474 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 IGHV5-10-1A0A0J9YXX1 117 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 CASC3O15234 703 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 PRPSAP2O60256 369 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FZD6O60353 706 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 PRAMEF10O60809 474 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 LRCH4O75427 683 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 HEXIM1O94992 359 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 RECKO95980 971 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FUCA1P04066 466 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 PRKCGP05129 697 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 PCCBP05166 539 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FGF1P05230 155 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 THRAP10827 490 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 KRT10P13645 584 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 CD1CP29017 333 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 VIPR1P32241 457 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 MAN1A1P33908 653 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SERPINB6P35237 376 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 KLK7P49862 253 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 ATP1A2P50993 1020 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 RPL26P61254 145 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 CDK3Q00526 305 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 MYL5Q02045 173 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 UBXN1Q04323 297 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 MAP7Q14244 749 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 CNGA3Q16281 694 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 HSP90AA4PQ58FG1 418 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 LRRC73Q5JTD7 316 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 KCTD16Q68DU8 428 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 TMEM71Q6P5X7 295 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FOXR1Q6PIV2 292 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 WDR74Q6RFH5 385 aaPredicted RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 ADAMTSL4Q6UY14 1074 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 LEKR1Q6ZMV7 388 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 RD3Q7Z3Z2 195 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 TECPR1Q7Z6L1 1165 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 NRROSQ86YC3 692 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 NAGSQ8N159 534 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 NDUFAF2Q8N183 169 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 TEX26Q8N6G2 289 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 ARFGAP1Q8N6T3 406 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 NIPA2Q8N8Q9 360 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 AVL9Q8NBF6 648 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 AGBL5Q8NDL9 886 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FAM71BQ8TC56 605 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 TEKT4Q8WW24 435 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 USP7Q93009 1102 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 NKD1Q969G9 470 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 NUS1Q96E22 293 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 TRIM11Q96F44 468 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 LYSMD1Q96S90 227 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 FUCA2Q9BTY2 467 aa6.1□□□□□ -1.43
LSM3P4-201ENST00000502948 SNRNP25Q9BV90 132 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms