RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RAB6CQ9H0N0 254 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 DENND2DQ9H6A0 471 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 OSER1Q9NX31 292 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 UBP1Q9NZI7 540 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 MTRRQ9UBK8 725 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ANGPTL3Q9Y5C1 460 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ANGPT2O15123 496 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 NPPAP01160 153 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 AHSGP02765 367 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ESR1P03372 595 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 DDX5P17844 614 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 IL10P22301 178 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 DDX6P26196 483 aaKnown RBP eCLIP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CCND3P30281 292 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 RECQLP46063 649 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PTDSS1P48651 473 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ACADVLP49748 655 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CCR3P51677 355 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 NFKB2Q00653 900 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 BTKQ06187 659 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 SULT2A1Q06520 285 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ARHGAP15Q53QZ3 475 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 KDELC1Q6UW63 502 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 HACD2Q6Y1H2 254 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 GLT6D1Q7Z4J2 308 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 NPWQ8N729 165 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 RBM15BQ8NDT2 890 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 C3orf58Q8NDZ4 430 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 FBXO22Q8NEZ5 403 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 DNAJB8Q8NHS0 232 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 BLOC1S5Q8TDH9 187 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CAPNS2Q96L46 248 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 MRGPRX2Q96LB1 330 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 SLC39A3Q9BRY0 314 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 RNF112Q9ULX5 631 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 LOC285095A0A1B0GVY8 99 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 FOXO6A8MYZ6 492 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PRR5-ARHGAP8B1AHC4 643 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 UGT1A9O60656 530 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CCDC166P0CW27 439 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 T-ENOLP0DO92 83 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PTGER3P43115 390 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CACNA2D1P54289 1103 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PKNOX1P55347 436 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 IL2P60568 153 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 POLR2LP62875 67 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PITX1P78337 314 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ARHGAP8P85298 464 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 BNIP2Q12982 314 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 EIF4EBP2Q13542 120 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ARMC12Q5T9G4 340 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ESRP1Q6NXG1 681 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CDHR3Q6ZTQ4 885 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ADAMTSL2Q86TH1 951 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CILP2Q8IUL8 1156 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 LEMD2Q8NC56 503 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 DDHD1Q8NEL9 900 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 KCTD4Q8WVF5 259 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ULK4Q96C45 1275 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 TMA16Q96EY4 203 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 TOX2Q96NM4 488 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PANX3Q96QZ0 392 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 UGT1A7Q9HAW7 530 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 UGT1A10Q9HAW8 530 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 UGT1A8Q9HAW9 530 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 FBXO6Q9NRD1 293 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 SPG21Q9NZD8 308 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 POLG2Q9UHN1 485 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 AGO1Q9UL18 857 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 STX16-NPEPL1H3BU86 382 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 TRIM38O00635 465 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 STX16O14662 325 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PEX11AO75192 247 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 SUPT7LO94864 414 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 INHAP05111 366 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 MBL2P11226 248 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PIK3R1P27986 724 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 NRLP54845 237 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 PFKPQ01813 784 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 FOXM1Q08050 763 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CDH18Q13634 790 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CYTH1Q15438 398 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 COQ5Q5HYK3 327 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 SLC8B1Q6J4K2 584 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ZCCHC23Q6ZST2 131 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 CMC1Q7Z7K0 106 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ALYREFQ86V81 257 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 LRRTM3Q86VH5 581 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 DEFB107AQ8IZN7 70 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 FBXO39Q8N4B4 442 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 ZNF461Q8TAF7 563 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 GPR63Q9BZJ6 419 aa7.41□□□□□ -1.22
PDGFC-203ENST00000502773 MRPL17Q9NRX2 175 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 NLE1Q9NVX2 485 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 UBA6A0AVT1 1052 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 FAM155AB1AL88 458 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-203ENST00000502773 RAD51BO15315 384 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms