RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SH3BP1Q9Y3L3 701 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF536O15090 1300 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 MGAT4DA6NG13 374 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 NDUFS2O75306 463 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 ITGALP20701 1170 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 SEPHS1P49903 392 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 SP3Q02447 781 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 TYSND1Q2T9J0 566 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 GPRIN3Q6ZVF9 776 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 OR52K2Q8NGK3 314 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 MFSD3Q96ES6 412 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 HDHD2Q9H0R4 259 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 PSME2Q9UL46 239 aa17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
HMGXB3-201ENST00000502717 RGS10O43665 173 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 MFSD11O43934 449 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 METTL18O95568 372 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 AMHP03971 560 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 IL1R2P27930 398 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ATP6V0D1P61421 351 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 CASP12Q6UXS9 341 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ZFP28Q8NHY6 868 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 KCTD15Q96SI1 283 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ZMYM5Q9UJ78 669 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 FAM50BQ9Y247 325 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 SNX8Q9Y5X2 465 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 YDJCA8MPS7 323 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 FAM220BPB1ANY3 271 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 E7ESA3 106 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 URODP06132 367 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 AKR1A1P14550 325 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 PTPN9P43378 593 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 OLR1P78380 273 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 CCNIQ14094 377 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 QPRTQ15274 297 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ELOVL4Q9GZR5 314 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 PCDH12Q9NPG4 1184 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 SCUBE2Q9NQ36 999 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 WRAP73Q9P2S5 460 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 VNN1O95497 513 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ARHGEF7Q14155 803 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 TMEM198Q66K66 360 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF57Q68EA5 555 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 CENPSQ8N2Z9 138 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 PTCD2Q8WV60 388 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 NRG4Q8WWG1 115 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ADGRE2Q9UHX3 823 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 PCDHB8Q9UN66 801 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 MYH15Q9Y2K3 1946 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 SPATA31C2B4DYI2 1134 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 MYL12BO14950 172 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 ANGPTL1O95841 491 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 NPR3P17342 541 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 PIK3CGP48736 1102 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 SMARCD1Q96GM5 515 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 UBA2Q9UBT2 640 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 CNTN6Q9UQ52 1028 aa17.23■□□□□ 0.35
HMGXB3-201ENST00000502717 CARNS1A5YM72 827 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 F5H5T6 163 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 EI24O14681 340 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 GUCA1CO95843 209 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 UBA1P22314 1058 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 NR4A1P22736 598 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 CHI3L1P36222 383 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 GNA12Q03113 381 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 TYW3Q6IPR3 259 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 CANT1Q8WVQ1 401 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 SH3KBP1Q96B97 665 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 PRRG3Q9BZD7 231 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 DIABLOQ9NR28 239 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 INTS10Q9NVR2 710 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 LOC110117498-PIK3R3F6TDL0 507 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 RAMP2O60895 175 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 BCAP31P51572 246 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 OXCT1P55809 520 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 CDC42P60953 191 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 MYBPC3Q14896 1274 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 DLG2Q15700 870 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 OGFRL1Q5TC84 451 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 DDX53Q86TM3 631 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 PARP8Q8N3A8 854 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 MKS1Q9NXB0 559 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 PNMA8BQ9ULN7 279 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 BCKDKO14874 412 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 WBP4O75554 376 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 EPN2O95208 641 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 UBAP2Q5T6F2 1119 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 B3GALNT2Q8NCR0 500 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 REXO5Q96IC2 774 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 SYNDIG1Q9H7V2 258 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 ZNF358Q9NW07 568 aa17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 PRG3Q9Y2Y8 225 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-201ENST00000502717 A0A0J9YVX5 310 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms