RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CKBP12277 381 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 MAGEA11P43364 429 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PSMD8P48556 350 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CDH13P55290 713 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 FCGRTP55899 365 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ARPP19P56211 112 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 POLE2P56282 527 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 HERVK_113P63132 956 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 NFKB2Q00653 900 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 STX5Q13190 355 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 PARP15Q460N3 678 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ISLR2Q6UXK2 745 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 LARP4Q71RC2 724 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SLC24A5Q71RS6 500 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 GALNT15Q8N3T1 639 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 MARVELD2Q8N4S9 558 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 TMEM102Q8N9M5 508 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ATP6V1E2Q96A05 226 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 ERVK-6Q9BXR3 956 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 POLR1EQ9GZS1 481 aaKnown RBP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 UNC93B1Q9H1C4 597 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SUCOQ9UBS9 1254 aaKnown RBP9.87□□□□□ -0.83
CLIP1-204ENST00000501271 SARDHQ9UL12 918 aa9.87□□□□□ -0.83
CLIP1-204ENST00000501271 CASP8AP2Q9UKL3 1982 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PRORSD1PA6NEY8 169 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 LRRC14BA6NHZ5 514 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 H3BMM5 538 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CD3EAPO15446 510 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 AP1G1O43747 822 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PRAMEF11O60813 436 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 GPC4O75487 556 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 TRPA1O75762 1119 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SIX3O95343 332 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 GLP2RO95838 553 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 EOMESO95936 686 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ALDOCP09972 364 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SMIM18P0DKX4 95 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ZNF37AP17032 561 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PMLP29590 882 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PBX3P40426 434 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SLC26A3P40879 764 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SH3BP2P78314 561 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 MAPRE2Q15555 327 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 OR4D1Q15615 310 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CNPY1Q3B7I2 92 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 UGT3A2Q3SY77 523 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 IL23RQ5VWK5 629 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 IL31Q6EBC2 164 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 RYBPQ8N488 228 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 C19orf60Q96EN9 201 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 FEM1CQ96JP0 617 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CENPKQ9BS16 269 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 TRMOQ9BU70 441 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SPATA16Q9BXB7 569 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CCSER2Q9H7U1 834 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PDFQ9HBH1 243 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PTGDR2Q9Y5Y4 395 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 AP4B1Q9Y6B7 739 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ANKRD12Q6UB98 2062 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 A0A0D9SEW6 157 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 UBXN8O00124 270 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 MRASO14807 208 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 RPP40O75818 363 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 VNN2O95498 520 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PENKP01210 267 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CAPNS1P04632 268 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 FGF1P05230 155 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SNRPB2P08579 225 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ELNP15502 786 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 HLA-DPA1P20036 260 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CST5P28325 142 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CDKL1Q00532 357 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 TRIM25Q14258 630 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 GK3PQ14409 553 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ZNF235Q14590 738 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 FAM171A1Q5VUB5 890 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 LAYNQ6UX15 382 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 CFAP52Q8N1V2 620 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 PTGR2Q8N8N7 351 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 ADCY4Q8NFM4 1077 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SEPT5Q99719 369 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SLC39A3Q9BRY0 314 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 GPR62Q9BZJ7 368 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 TLR8Q9NR97 1041 aaKnown RBP9.86□□□□□ -0.83
CLIP1-204ENST00000501271 GIMAP2Q9UG22 337 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 DNAJC15Q9Y5T4 150 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 AK5Q9Y6K8 562 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 SQORQ9Y6N5 450 aa9.86□□□□□ -0.83
CLIP1-204ENST00000501271 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-204ENST00000501271 SYN3O14994 580 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 C8BP07358 591 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 MTHFD2P13995 350 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 MAPKAPK2P49137 400 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 SUOXP51687 545 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 KCNQ1P51787 676 aa9.85□□□□□ -0.83
CLIP1-204ENST00000501271 FOXA1P55317 472 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms