RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 RHPN2P1A8MT19 583 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 AGRPO00253 132 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 SLC28A2O43868 658 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 CPNE6O95741 557 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 ITGB2P05107 769 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 SFTPCP11686 197 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 ALDH4A1P30038 563 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 HSPA9P38646 679 aaKnown RBP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 MAPK10P53779 464 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 ILF3Q12906 894 aaKnown RBP eCLIP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 HLTFQ14527 1009 aaKnown RBP eCLIP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 LBRQ14739 615 aaKnown RBP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 CA9Q16790 459 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 KCTD16Q68DU8 428 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 PLEKHA7Q6IQ23 1121 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 BBS5Q8N3I7 341 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 USP7Q93009 1102 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 KCTD15Q96SI1 283 aaPredicted RBP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 SNRNP25Q9BV90 132 aaKnown RBP12.05□□□□□ -0.48
CNOT4-211ENST00000498534 LGR4Q9BXB1 951 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 GSDMCQ9BYG8 508 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 CLMPQ9H6B4 373 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 ZWILCHQ9H900 591 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
CNOT4-211ENST00000498534 PRAMEF33A0A0G2JMD5 474 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 A0A1W2PQC6 194 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 B4GAT1O43505 415 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 PRAMEF10O60809 474 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 SOCS5O75159 536 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 FTLP02792 175 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 MYCLP1P12525 358 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 KRT10P13645 584 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CCNB1P14635 433 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 ITIH1P19827 911 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CD82P27701 267 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 MIPP30301 263 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 B4GALNT1Q00973 533 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 SLC10A7Q0GE19 358 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 ZNF235Q14590 738 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 STX1AQ16623 288 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CLPPQ16740 277 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 AMZ1Q400G9 498 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 MAP9Q49MG5 647 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 DENND2CQ68D51 928 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 ARHGAP36Q6ZRI8 547 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 RBM43Q6ZSC3 357 aaKnown RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 PRICKLE2Q7Z3G6 844 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 ARHGAP12Q8IWW6 846 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CCL4L1Q8NHW4 92 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 GPBAR1Q8TDU6 330 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 FNIP1Q8TF40 1166 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 ZDHHC1Q8WTX9 485 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 NUS1Q96E22 293 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 COQ10AQ96MF6 247 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 B3GNT4Q9C0J1 378 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CARS2Q9HA77 564 aaKnown RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 SPATS2LQ9NUQ6 558 aaKnown RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 TRNAU1APQ9NX07 287 aaKnown RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 TAS2R14Q9NYV8 317 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 CWC15Q9P013 229 aaKnown RBP12.04□□□□□ -0.48
CNOT4-211ENST00000498534 B4GALT6Q9UBX8 382 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 PHTF1Q9UMS5 762 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 PCDHGC4Q9Y5F7 938 aa12.04□□□□□ -0.48
CNOT4-211ENST00000498534 MYO18BQ8IUG5 2567 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 GOLGA6CA6NDK9 693 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 H3BRJ5 948 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 FGF1P05230 155 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 GOLGA6DP0CG33 693 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-211ENST00000498534 GZMAP12544 262 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 VIPR1P32241 457 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 ARL4AP40617 200 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 GPR3P46089 330 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 OR1D5P58170 312 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 NFATC3Q12968 1075 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 BOLA3Q53S33 107 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 ZFAND4Q86XD8 727 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 SLITRK4Q8IW52 837 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 SFTPA2Q8IWL1 248 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 NDUFAF2Q8N183 169 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 ARFGAP1Q8N6T3 406 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 NPWQ8N729 165 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 EXD3Q8N9H8 876 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 EXTL1Q92935 676 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 TEX101Q9BY14 249 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 NAT10Q9H0A0 1025 aaKnown RBP12.03□□□□□ -0.48
CNOT4-211ENST00000498534 SEMA6CQ9H3T2 930 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 SUDS3Q9H7L9 328 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-211ENST00000498534 RDH14Q9HBH5 336 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 MRPL47Q9HD33 250 aaKnown RBP12.03□□□□□ -0.48
CNOT4-211ENST00000498534 GOLGA6AQ9NYA3 693 aa12.03□□□□□ -0.48
CNOT4-211ENST00000498534 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms