RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ABCG1P45844 678 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 LEPRP48357 1165 aaKnown RBP12.48□□□□□ -0.41
AFF3-215ENST00000498090 CHN2P52757 468 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 SMAD3P84022 425 aaKnown RBP12.48□□□□□ -0.41
AFF3-215ENST00000498090 PFKPQ01813 784 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 MTA1Q13330 715 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 SQLEQ14534 574 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 ACAP2Q15057 778 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 SFT2D3Q587I9 215 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 ESRP1Q6NXG1 681 aaKnown RBP12.48□□□□□ -0.41
AFF3-215ENST00000498090 LILRA6Q6PI73 481 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 CHSY3Q70JA7 882 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 MARVELD2Q8N4S9 558 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
AFF3-215ENST00000498090 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 PEX13Q92968 403 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 NXNL1Q96CM4 212 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 ASB2Q96Q27 587 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 CDRT15Q96T59 188 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 MRPL1Q9BYD6 325 aaKnown RBP12.48□□□□□ -0.41
AFF3-215ENST00000498090 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 EPB41L1Q9H4G0 881 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 WDR41Q9HAD4 459 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 ATP13A1Q9HD20 1204 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
AFF3-215ENST00000498090 KCNU1A8MYU2 1149 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 H0YJX3 145 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 SLC7A4O43246 635 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 IPO13O94829 963 aaKnown RBP12.47□□□□□ -0.41
AFF3-215ENST00000498090 CAPNS1P04632 268 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 GMPRP36959 345 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 AVPR1AP37288 418 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 GLRBP48167 497 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 PGFP49763 221 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 AQP4P55087 323 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 MLLT6P55198 1093 aaPredicted RBP12.47□□□□□ -0.41
AFF3-215ENST00000498090 TAS2R39P59534 338 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 MPP1Q00013 466 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 CTBP1Q13363 440 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 CNGA3Q16281 694 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 GRAMD1BQ3KR37 738 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 LIN52Q52LA3 116 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 LPCAT4Q643R3 524 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 ZNF470Q6ECI4 717 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 CEP97Q8IW35 865 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 DENND6AQ8IWF6 608 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 UMODL1-AS1Q8N2C9 162 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 PELI3Q8N2H9 469 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 AGR3Q8TD06 166 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 GIPC2Q8TF65 315 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 RCN3Q96D15 328 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 SPATA17Q96L03 361 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 MRGPRX2Q96LB1 330 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 POMKQ9H5K3 350 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 MEAF6Q9HAF1 191 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 PLK2Q9NYY3 685 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 IL37Q9NZH6 218 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 HSFX1Q9UBD0 423 aa12.47□□□□□ -0.41
AFF3-215ENST00000498090 SUCOQ9UBS9 1254 aaKnown RBP12.47□□□□□ -0.41
AFF3-215ENST00000498090 COPG1Q9Y678 874 aaKnown RBP12.47□□□□□ -0.41
AFF3-215ENST00000498090 E9PAM4 449 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 TRIM38O00635 465 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 RNASEH1O60930 286 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 ZMPSTE24O75844 475 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 ADH1AP07327 375 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 SPATA31D3P0C874 917 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 PABPC4LP0CB38 370 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 ZCCHC18P0CG32 403 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 RHOQP17081 205 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 SERPINH1P50454 418 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 ATP4BP51164 291 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 INHBCP55103 352 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 TRAP1Q12931 704 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 DYNC1I2Q13409 638 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 ADGRE1Q14246 886 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 PDK3Q15120 406 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 TECRLQ5HYJ1 363 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 TSTD2Q5T7W7 516 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 IRAK1BP1Q5VVH5 260 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 CWF19L1Q69YN2 538 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 ARHGAP36Q6ZRI8 547 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 SPATA31D4Q6ZUB0 917 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 TCEAL8Q8IYN2 117 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 NUP93Q8N1F7 819 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 CCNYL1Q8N7R7 359 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 HEXDCQ8WVB3 486 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 NCSTNQ92542 709 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 ASB9Q96DX5 294 aa12.46□□□□□ -0.41
AFF3-215ENST00000498090 IMP4Q96G21 291 aaKnown RBP12.46□□□□□ -0.41
AFF3-215ENST00000498090 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms