RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 DONSONQ9NYP3 566 aa18.58■□□□□ 0.56
PRKCB-209ENST00000498058 AIPL1Q9NZN9 384 aa18.58■□□□□ 0.56
PRKCB-209ENST00000498058 RNF215Q9Y6U7 377 aa18.58■□□□□ 0.56
PRKCB-209ENST00000498058 A0A0U1RQS6 177 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 AKR1B15C9JRZ8 316 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 HTRA2O43464 458 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 RNF8O76064 485 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 HOXC4P09017 264 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 GZMAP12544 262 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 MLLT3P42568 568 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 INHBCP55103 352 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 HLTFQ14527 1009 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 TGIF1Q15583 401 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 CNGA3Q16281 694 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 SMTNL2Q2TAL5 461 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 CERCAMQ5T4B2 595 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 PNCKQ6P2M8 343 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 RAB11FIP2Q7L804 512 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 NRROSQ86YC3 692 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 CCNJLQ8IV13 435 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 CBARPQ8N350 705 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 FAM46DQ8NEK8 389 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 ATL2Q8NHH9 583 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 SYN2Q92777 582 aaPredicted RBP18.57■□□□□ 0.56
PRKCB-209ENST00000498058 ZNF653Q96CK0 615 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 WBP1Q96G27 269 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 CYP4F12Q9HCS2 524 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 MYO1AQ9UBC5 1043 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 SEPT3Q9UH03 358 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 ST14Q9Y5Y6 855 aa18.57■□□□□ 0.56
PRKCB-209ENST00000498058 CACNB4O00305 520 aaPredicted RBP18.56■□□□□ 0.56
PRKCB-209ENST00000498058 TNFRSF10CO14798 259 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 DESP17661 470 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 ITIH1P19827 911 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 LHCGRP22888 699 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 CCKBRP32239 447 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 ETV5P41161 510 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 GSDMDP57764 484 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 AP1S1P61966 158 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 ZFP36L1Q07352 338 aaKnown RBP18.56■□□□□ 0.56
PRKCB-209ENST00000498058 TRAF2Q12933 501 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 ACOX1Q15067 660 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 TMCO4Q5TGY1 634 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 PPP1R2P3Q6NXS1 205 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 HSD11B1LQ7Z5J1 315 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 POLNQ7Z5Q5 900 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 SPRED1Q7Z699 444 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 ZNF605Q86T29 641 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 PSTKQ8IV42 348 aaKnown RBP18.56■□□□□ 0.56
PRKCB-209ENST00000498058 SPC24Q8NBT2 197 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 OR8K1Q8NGG5 319 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 SMIM14Q96QK8 99 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 NOD2Q9HC29 1040 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 SPATS2LQ9NUQ6 558 aaKnown RBP18.56■□□□□ 0.56
PRKCB-209ENST00000498058 APPL1Q9UKG1 709 aa18.56■□□□□ 0.56
PRKCB-209ENST00000498058 PRSS38A1L453 326 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 B4DGG1 531 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 MAFKO60675 156 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 MFAP3LO75121 409 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 GLB1P16278 677 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 MAXP61244 160 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 B4GALNT1Q00973 533 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 DPYSL2Q16555 572 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 C14orf28Q4W4Y0 310 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 RFLNAQ6ZTI6 216 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 SPOCK2Q92563 424 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 CCDC97Q96F63 343 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-209ENST00000498058 BTBD6Q96KE9 485 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 ZNF599Q96NL3 588 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 ISCUQ9H1K1 167 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 WDR26Q9H7D7 661 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 SUDS3Q9H7L9 328 aaPredicted RBP18.55■□□□□ 0.56
PRKCB-209ENST00000498058 LRIT1Q9P2V4 623 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 MOSPD1Q9UJG1 213 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 PCDHGA7Q9Y5G6 932 aa18.55■□□□□ 0.56
PRKCB-209ENST00000498058 TENM4Q6N022 2769 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 B4GAT1O43505 415 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 HEXIM1O94992 359 aaKnown RBP18.54■□□□□ 0.56
PRKCB-209ENST00000498058 CEACAM5P06731 702 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 RARAP10276 462 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 PCK1P35558 622 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 RENBPP51606 427 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 MAZP56270 477 aaKnown RBP18.54■□□□□ 0.56
PRKCB-209ENST00000498058 POLR2LP62875 67 aaKnown RBP18.54■□□□□ 0.56
PRKCB-209ENST00000498058 KLHL30Q0D2K2 578 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 IHHQ14623 411 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 DENND2CQ68D51 928 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 CCDC81Q6ZN84 652 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 TSPAN33Q86UF1 283 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 C17orf82Q86X59 251 aaPredicted RBP18.54■□□□□ 0.56
PRKCB-209ENST00000498058 JAMLQ86YT9 394 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 SLITRK4Q8IW52 837 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 LZTR1Q8N653 840 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 OR6C4Q8NGE1 309 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 HSPH1Q92598 858 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 NUS1Q96E22 293 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 CSPG4P5Q96PW8 444 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 NUDCD1Q96RS6 583 aa18.54■□□□□ 0.56
PRKCB-209ENST00000498058 MGME1Q9BQP7 344 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms