RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SEC14L1Q92503 715 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 KLK6Q92876 244 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
CPNE1-227ENST00000498056 MYOCQ99972 504 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 LRFN3Q9BTN0 628 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 FRMD8Q9BZ67 464 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-227ENST00000498056 IL22Q9GZX6 179 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 TRABDQ9H4I3 376 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 C6orf106Q9H6K1 298 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-227ENST00000498056 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 ZFYVE1Q9HBF4 777 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 MAGEE1Q9HCI5 957 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 GDF3Q9NR23 364 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 WSB2Q9NYS7 404 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-227ENST00000498056 PKD2L2Q9NZM6 624 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 MTRF1LQ9UGC7 380 aaKnown RBP13.58□□□□□ -0.24
CPNE1-227ENST00000498056 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 TCAF1Q9Y4C2 921 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 MAD1L1Q9Y6D9 718 aa13.58□□□□□ -0.24
CPNE1-227ENST00000498056 ADAMTS9Q9P2N4 1935 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 HEATR9A2RTY3 570 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 H0Y858 1186 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 PSMD11O00231 422 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 RPP40O75818 363 aaKnown RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 SP9P0CG40 484 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 MAGEA3P43357 314 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 STC1P52823 247 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 DRG2P55039 364 aaKnown RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 RPS21P63220 83 aaKnown RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 TUBB4BP68371 445 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 CUL1Q13616 776 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 TAF1AQ15573 450 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 ERCC6LQ2NKX8 1250 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 HP1BP3Q5SSJ5 553 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 FNBP1LQ5T0N5 605 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 KIAA0895LQ68EN5 471 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 LIPIQ6XZB0 460 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 SLC36A4Q6YBV0 504 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 CENPUQ71F23 418 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 ARMCX6Q7L4S7 300 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 HSD11B1LQ7Z5J1 315 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 ANKMY2Q8IV38 441 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 DEFB119Q8N690 84 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 GAB3Q8WWW8 586 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 NUS1Q96E22 293 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 FMO2Q99518 471 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 FAM126AQ9BYI3 521 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 FAM129AQ9BZQ8 928 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 KDM4CQ9H3R0 1056 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 BPIFA1Q9NP55 256 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 SAYSD1Q9NPB0 183 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 ZDHHC18Q9NUE0 388 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 MBD1Q9UIS9 605 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 ZFR2Q9UPR6 939 aaKnown RBP13.57□□□□□ -0.24
CPNE1-227ENST00000498056 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 PI4KAP42356 2102 aa13.57□□□□□ -0.24
CPNE1-227ENST00000498056 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 C2orf81A6NN90 581 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 DLL1O00548 723 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 CCL22O00626 93 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 STX7O15400 261 aaKnown RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 TM7SF2O76062 418 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 LPOP22079 712 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ECHS1P30084 290 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ETV3P41162 512 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 NPY2RP49146 381 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ZNF140P52738 457 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 TMPRSS15P98073 1019 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 PTPRCAPQ14761 206 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 FASTKD3Q14CZ7 662 aaKnown RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ELF2Q15723 593 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 SMAD1Q15797 465 aaKnown RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ZNF528Q3MIS6 628 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 CEP68Q76N32 757 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 TRIM69Q86WT6 500 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ZBED8Q8IZ13 594 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 AGGF1Q8N302 714 aaeCLIP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 OR4K2Q8NGD2 314 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 OR13C4Q8NGS5 318 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 BRSK1Q8TDC3 778 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 RUBCNQ92622 972 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 STAMBPL1Q96FJ0 436 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 CFAP36Q96G28 342 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 DNAJC1Q96KC8 554 aaKnown RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 HSPA12BQ96MM6 686 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 RANBP9Q96S59 729 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 TRIM56Q9BRZ2 755 aaKnown RBP13.56□□□□□ -0.24
CPNE1-227ENST00000498056 FZD3Q9NPG1 666 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 ZSCAN32Q9NX65 697 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 KCTD3Q9Y597 815 aa13.56□□□□□ -0.24
CPNE1-227ENST00000498056 SDK1Q7Z5N4 2213 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms