RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 SPRED1Q7Z699 444 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 SFTPA2Q8IWL1 248 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 PELI3Q8N2H9 469 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 CCL4L1Q8NHW4 92 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 KIAA1524Q8TCG1 905 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 GPBAR1Q8TDU6 330 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 TRIM11Q96F44 468 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 MED8Q96G25 268 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 NUDCD1Q96RS6 583 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 CMKLR1Q99788 373 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 BPIFA3Q9BQP9 254 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 TEX101Q9BY14 249 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 PISDQ9UG56 409 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 PHTF1Q9UMS5 762 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 LOXL2Q9Y4K0 774 aa18.25■□□□□ 0.51
ATPAF2-209ENST00000497871 LRRK1Q38SD2 2015 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 A0A1W2PQC6 194 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 SMTNL1A8MU46 457 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 B4DGG1 531 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 B8ZZF3 427 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 J3QKU1 62 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 HEXIM1O94992 359 aaKnown RBP18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 MBD3O95983 291 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 CCNB1P14635 433 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 AMPD1P23109 780 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 IL1R2P27930 398 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 VIPR1P32241 457 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 B4GALNT1Q00973 533 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 KLHL30Q0D2K2 578 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 CNGA3Q16281 694 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 TMCO3Q6UWJ1 677 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 POLNQ7Z5Q5 900 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 C17orf82Q86X59 251 aaPredicted RBP18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 BBS5Q8N3I7 341 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 PDCD6IPQ8WUM4 868 aaKnown RBP18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 ZNF653Q96CK0 615 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 NUS1Q96E22 293 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 ISCUQ9H1K1 167 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 CARS2Q9HA77 564 aaKnown RBP18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 PHPT1Q9NRX4 125 aaPredicted RBP18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 COL6A6A6NMZ7 2263 aa18.24■□□□□ 0.51
ATPAF2-209ENST00000497871 AHCTF1Q8WYP5 2266 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 PSMD11O00231 422 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 MAFKO60675 156 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 CEACAM5P06731 702 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 CYP2A6P11509 494 aaPredicted RBP18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 TGIF1Q15583 401 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 RALGPS1Q5JS13 557 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 SLITRK4Q8IW52 837 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 PGBD5Q8N414 524 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 SCRN2Q96FV2 425 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 MGME1Q9BQP7 344 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 GSDMCQ9BYG8 508 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 NOD2Q9HC29 1040 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 SPATS2LQ9NUQ6 558 aaKnown RBP18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 ETNK2Q9NVF9 386 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 WDR70Q9NW82 654 aa18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 TRNAU1APQ9NX07 287 aaKnown RBP18.23■□□□□ 0.51
ATPAF2-209ENST00000497871 ZW10O43264 779 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 B4GAT1O43505 415 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 CPP00450 1065 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 FUCA1P04066 466 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 FGF1P05230 155 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 LIPCP11150 499 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 TEAD1P28347 426 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 ILF3Q12906 894 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 PIGHQ14442 188 aaPredicted RBP18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 CLPPQ16740 277 aaPredicted RBP18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 SMTNL2Q2TAL5 461 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 ANO6Q4KMQ2 910 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 DENND2CQ68D51 928 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 PIM3Q86V86 326 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 HEATR4Q86WZ0 1026 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 NRROSQ86YC3 692 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 ZDHHC1Q8WTX9 485 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 NSMCE1Q8WV22 266 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 DTD2Q96FN9 168 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 CSPG4P5Q96PW8 444 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 SEPT10Q9P0V9 454 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 UNC13CQ8NB66 2214 aa18.22■□□□□ 0.51
ATPAF2-209ENST00000497871 CPNE6O95741 557 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 RARAP10276 462 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 SKILP12757 684 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 ITIH1P19827 911 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 ETV3P41162 512 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 CDH6P55285 790 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 CDK3Q00526 305 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 TRAF2Q12933 501 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 PEX6Q13608 980 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 MARC1Q5VT66 337 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 XKR5Q6UX68 686 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 USP53Q70EK8 1073 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 TMPRSS9Q7Z410 1059 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 ZNF438Q7Z4V0 828 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 HSD11B1LQ7Z5J1 315 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 HSPH1Q92598 858 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 SGF29Q96ES7 293 aa18.21■□□□□ 0.51
ATPAF2-209ENST00000497871 MCCC1Q96RQ3 725 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms