RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 MMP2P08253 660 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 SPINK2P20155 84 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 NR2C2P49116 596 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 YPEL5P62699 121 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 DYNLT1P63172 113 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 ITKQ08881 620 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 PDE1CQ14123 709 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 LONRF2Q1L5Z9 754 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 INAVAQ3KP66 663 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 TFDP3Q5H9I0 405 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 ARMC12Q5T9G4 340 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 B4GALNT4Q76KP1 1039 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 CHCHD4Q8N4Q1 142 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 ADAMTS14Q8WXS8 1223 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 SCRN2Q96FV2 425 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 MS4A14Q96JA4 679 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 COQ10AQ96MF6 247 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 SMIM14Q96QK8 99 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 HOMER3Q9NSC5 361 aa16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 ARGLU1Q9NWB6 273 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-214ENST00000497677 NPIPB15A6NHN6 443 aaPredicted RBP16■□□□□ 0.15
CTDSP1-214ENST00000497677 HYAL3O43820 417 aaPredicted RBP16■□□□□ 0.15
CTDSP1-214ENST00000497677 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
CTDSP1-214ENST00000497677 TRIM16O95361 564 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 LHCGRP22888 699 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 VIPR1P32241 457 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 PTPN7P35236 360 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 TFDP2Q14188 446 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 INPP5AQ14642 412 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 CNGA3Q16281 694 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 KAZNQ674X7 775 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 PARGQ86W56 976 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16■□□□□ 0.15
CTDSP1-214ENST00000497677 PLA2G15Q8NCC3 412 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 SCNM1Q9BWG6 230 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 BRD8Q9H0E9 1235 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 DNAJC28Q9NX36 388 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 EFR3BQ9Y2G0 817 aa16■□□□□ 0.15
CTDSP1-214ENST00000497677 FAM221BA6H8Z2 402 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 ELFN1P0C7U0 828 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 PYGMP11217 842 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TGM2P21980 687 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 HNRNPKP61978 463 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■□□□□ 8.8
CTDSP1-214ENST00000497677 SKOR1P84550 965 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 AP1B1Q10567 949 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 ZNF211Q13398 564 aaPredicted RBP15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 PRKD1Q15139 912 aaPredicted RBP15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 PROX2Q3B8N5 592 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TSPAN33Q86UF1 283 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 SLC13A5Q86YT5 568 aaPredicted RBP15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 PELI3Q8N2H9 469 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 PAF1Q8N7H5 531 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TADA1Q96BN2 335 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 HERPUD2Q9BSE4 406 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 APOOQ9BUR5 198 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TDRD1Q9BXT4 1180 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 FTSJ1Q9UET6 329 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 APOBEC2Q9Y235 224 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 CHKBQ9Y259 395 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TPRP12270 2363 aaKnown RBP15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 TMEM131Q92545 1883 aa15.99■□□□□ 0.15
CTDSP1-214ENST00000497677 ARID1BQ8NFD5 2236 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 A0A0J9YYE9 177 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 A0A0U1RQS6 177 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 GOLGA8CPA6NN73 597 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 PPP1R12AO14974 1030 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 SIGLEC6O43699 453 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 LDOC1O95751 146 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 TRBC1P01850 177 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 ALPIP09923 528 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 CYP2A6P11509 494 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 CTPS1P17812 591 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 HNF1BP35680 557 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 TRIM23P36406 574 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 THOP1P52888 689 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 C2orf54Q08AI8 447 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 MTM1Q13496 603 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 PTK2BQ14289 1009 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 ACOX1Q15067 660 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 TEX44Q53QW1 395 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 C8orf74Q6P047 294 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 MACC1Q6ZN28 852 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 BBS12Q6ZW61 710 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 BZW1Q7L1Q6 419 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 HSD11B1LQ7Z5J1 315 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 NOA1Q8NC60 698 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 OR4C6Q8NH72 309 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 ANKRD7Q92527 254 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 FUBP1Q96AE4 644 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 CNDP2Q96KP4 475 aaKnown RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 TMEM121BQ9BXQ6 578 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 CEP41Q9BYV8 373 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 TCEAL2Q9H3H9 227 aaPredicted RBP15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 HAUS2Q9NVX0 235 aa15.98■□□□□ 0.15
CTDSP1-214ENST00000497677 KLK13Q9UKR3 277 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms