RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	PTS	Q03393	145 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	SEPT6	Q14141	434 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	SLMAP	Q14BN4	828 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	LIPI	Q6XZB0	460 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	CEP128	Q6ZU80	1094 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ANKMY2	Q8IV38	441 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ZBED8	Q8IZ13	594 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	STAMBPL1	Q96FJ0	436 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ZNF778	Q96MU6	729 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	EBNA1BP2	Q99848	306 aa	Known RBP	13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	GPR63	Q9BZJ6	419 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	KDM4C	Q9H3R0	1056 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	C11orf16	Q9NQ32	467 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	CHRAC1	Q9NRG0	131 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	KCTD3	Q9Y597	815 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	MAD1L1	Q9Y6D9	718 aa		13.97	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ZNF318	Q5VUA4	2279 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	PIKFYVE	Q9Y2I7	2098 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	FAM237B	A0A1B0GVD1	139 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	MAGEB16	A2A368	324 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	C2orf81	A6NN90	581 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ZNF217	O75362	1048 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	C1S	P09871	688 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	LPO	P22079	712 aa	Predicted RBP	13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	PSMA3	P25788	255 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ACSL1	P33121	698 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	MAGEA4	P43358	317 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ZNF140	P52738	457 aa	Predicted RBP	13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	STC1	P52823	247 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	LAMB3	Q13751	1172 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	ARHGEF7	Q14155	803 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	TMEM31	Q5JXX7	168 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	TSTD2	Q5T7W7	516 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	CASC4	Q6P4E1	433 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	TMEM135	Q86UB9	458 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	FAM124A	Q86V42	546 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	DTWD2	Q8NBA8	298 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	FBXO36	Q8NEA4	188 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	OR14C36	Q8NHC7	312 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	PEX13	Q92968	403 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	CAVIN3	Q969G5	261 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	C19orf43	Q9BQ61	176 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	TRIM56	Q9BRZ2	755 aa	Known RBP	13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	NAT9	Q9BTE0	207 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	TXLNGY	Q9BZA5	131 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	BTBD1	Q9H0C5	482 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	SGK2	Q9HBY8	427 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	TREX1	Q9NSU2	369 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	IL17C	Q9P0M4	197 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	SAMD15	Q9P1V8	674 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	RIMKLB	Q9ULI2	386 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	CYP8B1	Q9UNU6	501 aa		13.96	□□□□□ -0.17
ATPAF2-208	ENST00000496852	CCDC163	A0A0D9SF12	145 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	C10orf142	B7Z368	130 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PSMD11	O00231	422 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	NEMP1	O14524	444 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	LAMTOR5	O43504	91 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	BUD23	O43709	281 aa	Known RBP	13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	ELFN1	P0C7U0	828 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	GM2A	P17900	193 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PGAM1	P18669	254 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	NMBR	P28336	390 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	AVPR2	P30518	371 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	LIG3	P49916	1009 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PDE1B	Q01064	536 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	ACVR1	Q04771	509 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PTPRCAP	Q14761	206 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	TSSK4	Q6SA08	328 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	CAPN12	Q6ZSI9	719 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	NLRP9	Q7RTR0	991 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	CCNJL	Q8IV13	435 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	C1orf210	Q8IVY1	113 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	OR13C4	Q8NGS5	318 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PYROXD1	Q8WU10	500 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	STYX	Q8WUJ0	223 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	ZBTB9	Q96C00	473 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	MFSD3	Q96ES6	412 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	C9orf72	Q96LT7	481 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	WRAP53	Q9BUR4	548 aa	Known RBP	13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PLAC1	Q9HBJ0	212 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	PREB	Q9HCU5	417 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	WSB2	Q9NYS7	404 aa	Predicted RBP	13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	CCDC78	A2IDD5	438 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	AXIN1	O15169	862 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	MMP20	O60882	483 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	USP1	O94782	785 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	SLC4A1	P02730	911 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	OXTR	P30559	389 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	DMWD	Q09019	674 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	MAP7D1	Q3KQU3	841 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	NEK5	Q6P3R8	708 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	CES3	Q6UWW8	571 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	HSD11B1L	Q7Z5J1	315 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	RAVER1	Q8IY67	606 aa	Known RBP	13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	OR4K2	Q8NGD2	314 aa		13.95	□□□□□ -0.18
ATPAF2-208	ENST00000496852	OR13J1	Q8NGT2	312 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms