RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CAPN8A6NHC0 703 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 NPIPB15A6NHN6 443 aaPredicted RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 LDOC1O95751 146 aaPredicted RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 ALPIP09923 528 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 NME1P15531 152 aaKnown RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 TSHRP16473 764 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 JUNDP17535 347 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 DGKAP23743 735 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 PTPN3P26045 913 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 HNF1BP35680 557 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 EIF3EP60228 445 aaKnown RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 SKOR1P84550 965 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 PPARDQ03181 441 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 FZD2Q14332 565 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 PCSK7Q16549 785 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 FAXCQ5TGI0 409 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 DARS2Q6PI48 645 aaKnown RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 B4GALNT4Q76KP1 1039 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 GLRX5Q86SX6 157 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 CNDP2Q96KP4 475 aaKnown RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 COQ10AQ96MF6 247 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 APOOQ9BUR5 198 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 DUSP23Q9BVJ7 150 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 FRMD8P1Q9BZ68 369 aaPredicted RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 WDR26Q9H7D7 661 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 GPR27Q9NS67 375 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 SPASTQ9UBP0 616 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 APOBEC3BQ9UH17 382 aaKnown RBP16.39■□□□□ 0.21
SF3A1-209ENST00000496189 BTBD3Q9Y2F9 522 aa16.39■□□□□ 0.21
SF3A1-209ENST00000496189 DCHS1Q96JQ0 3298 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 GOLGA8CPA6NN73 597 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 CBFA2T3O75081 653 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 PIAS2O75928 621 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 PYGLP06737 847 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 RBP3P10745 1247 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 CDK18Q07002 472 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 FOXC1Q12948 553 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 NFATC4Q14934 902 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 SHBQ15464 509 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 LRRC66Q68CR7 880 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 ESRP1Q6NXG1 681 aaKnown RBP16.38■□□□□ 0.21
SF3A1-209ENST00000496189 SLC13A5Q86YT5 568 aaPredicted RBP16.38■□□□□ 0.21
SF3A1-209ENST00000496189 RAVER1Q8IY67 606 aaKnown RBP16.38■□□□□ 0.21
SF3A1-209ENST00000496189 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 DTD2Q96FN9 168 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 WDR92Q96MX6 357 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 PPP1R2P1Q96PQ5 205 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 PHPT1Q9NRX4 125 aaPredicted RBP16.38■□□□□ 0.21
SF3A1-209ENST00000496189 PKD2L2Q9NZM6 624 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 KLQ9UEF7 1012 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 FAM153AQ9UHL3 310 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 RSPH14Q9UHP6 348 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 ANGPTL2Q9UKU9 493 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 DOLKQ9UPQ8 538 aa16.38■□□□□ 0.21
SF3A1-209ENST00000496189 CACNA1AO00555 2505 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 C1orf232A0A0U1RR37 186 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 ANKRD66B4E2M5 251 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 ENC1O14682 589 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 FFAR2O15552 330 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 AQP9O43315 295 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 CEP104O60308 925 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 PMPCBO75439 489 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 ANXA9O76027 345 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 RASGRP1O95267 797 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 MMP2P08253 660 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 FTH1P19P0C7X4 201 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 CTSEP14091 401 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 LHCGRP22888 699 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 ETV3P41162 512 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 KIAA1024LP59773 190 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 GNG11P61952 73 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 DAB2P98082 770 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 KLF1Q13351 362 aaPredicted RBP16.37■□□□□ 0.21
SF3A1-209ENST00000496189 PRPSAP1Q14558 356 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 ZNF542PQ5EBM4 170 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 RAET1GQ6H3X3 334 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 PNCKQ6P2M8 343 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 CRTC1Q6UUV9 634 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 ENPP7Q6UWV6 458 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 KDELC2Q7Z4H8 507 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 PHACTR4Q8IZ21 702 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 BAHD1Q8TBE0 780 aaPredicted RBP16.37■□□□□ 0.21
SF3A1-209ENST00000496189 SCG3Q8WXD2 468 aaKnown RBP16.37■□□□□ 0.21
SF3A1-209ENST00000496189 GLMNQ92990 594 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 PBKQ96KB5 322 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 HERPUD2Q9BSE4 406 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 FSD1LQ9BXM9 530 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 RAD18Q9NS91 495 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 KCND1Q9NSA2 647 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 NLGN3Q9NZ94 848 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 NCKIPSDQ9NZQ3 722 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 OR1A2Q9Y585 309 aa16.37■□□□□ 0.21
SF3A1-209ENST00000496189 USP27XA6NNY8 438 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 KCNN4O15554 427 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 CDK4P11802 303 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 NFKB1P19838 968 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 RBL1P28749 1068 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 GPR1P46091 355 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 WASHC5Q12768 1159 aa16.36■□□□□ 0.21
SF3A1-209ENST00000496189 GALNT3Q14435 633 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms