RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 Q6ZVL8 140 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 TSPAN33Q86UF1 283 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 TEX26Q8N6G2 289 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 Q8N9G6 341 aaPredicted RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 FAM46DQ8NEK8 389 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 OR8K1Q8NGG5 319 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 OR56A4Q8NGH8 313 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 ATL2Q8NHH9 583 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 FAM71BQ8TC56 605 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 CTNNBL1Q8WYA6 563 aaPredicted RBP9.61□□□□□ -0.87
MSH5-218ENST00000494646 TBATAQ96M53 351 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 COQ10AQ96MF6 247 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 MGME1Q9BQP7 344 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 FGF22Q9HCT0 170 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 RBM22Q9NW64 420 aaKnown RBP eCLIP9.61□□□□□ -0.87
MSH5-218ENST00000494646 CD84Q9UIB8 345 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 RABGEF1Q9UJ41 708 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 NENFQ9UMX5 172 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 SATB2Q9UPW6 733 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 TTLL3Q9Y4R7 772 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 ENTPD2Q9Y5L3 495 aa9.61□□□□□ -0.87
MSH5-218ENST00000494646 A0A1W2PNU3 283 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 A0A1W2PQ67 120 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 NPIPB15A6NHN6 443 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 MATN3O15232 486 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 CBFA2T2O43439 604 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 HEXIM1O94992 359 aaKnown RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 PGLSO95336 258 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 FUCA1P04066 466 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 CYP2A6P11509 494 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 TNNT1P13805 278 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 LHCGRP22888 699 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 KELP23276 732 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 KDELR1P24390 212 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 HNRNPH3P31942 346 aaKnown RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 TRIM23P36406 574 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 GARSP41250 739 aaKnown RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 LSSP48449 732 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 POLD2P49005 469 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 DSC2Q02487 901 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 GALNT2Q10471 571 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 SLC10A2Q12908 348 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 PAFAH1B3Q15102 231 aaKnown RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 ASTE1Q2TB18 679 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 SOWAHCQ53LP3 525 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 SPECC1LQ69YQ0 1117 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 LVRNQ6Q4G3 990 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 RBM44Q6ZP01 1051 aaKnown RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 MAP7D3Q8IWC1 876 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 CBARPQ8N350 705 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 SDR16C5Q8N3Y7 309 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 PQLC3Q8N755 202 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 ARL10Q8N8L6 244 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 KYQ8NBH2 561 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 CCNYQ8ND76 341 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 SLC35G2Q8TBE7 412 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 PIH1D2Q8WWB5 315 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 RAPGEF5Q92565 580 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 CCDC74AQ96AQ1 378 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 NUS1Q96E22 293 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 SCRN2Q96FV2 425 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 RBM15Q96T37 977 aaKnown RBP eCLIP9.6□□□□□ -0.872e-8■■■□□ 17.1
MSH5-218ENST00000494646 LGMNQ99538 433 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 DPEP2Q9H4A9 486 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 POLR1BQ9H9Y6 1135 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 SPTLC3Q9NUV7 552 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 ZNHIT6Q9NWK9 470 aaKnown RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 RCOR3Q9P2K3 495 aaPredicted RBP9.6□□□□□ -0.87
MSH5-218ENST00000494646 UVRAGQ9P2Y5 699 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 CHKBQ9Y259 395 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 DGKBQ9Y6T7 804 aa9.6□□□□□ -0.87
MSH5-218ENST00000494646 PTPRQQ9UMZ3 2332 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 B4DGG1 531 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 PDE2AO00408 941 aaPredicted RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 FZD6O60353 706 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 JCHAINP01591 159 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 HOXC4P09017 264 aaPredicted RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 CCNCP24863 283 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 RBMS1P29558 406 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 GPR1P46091 355 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 GNPDA1P46926 289 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 EPHB1P54762 984 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 KIAA1024LP59773 190 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 GBE1Q04446 702 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 COL9A2Q14055 689 aaPredicted RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 SPIDRQ14159 915 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 PDK2Q15119 407 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 IFI16Q16666 785 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 RAET1GQ6H3X3 334 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 DOK6Q6PKX4 331 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 B4GALNT4Q76KP1 1039 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 TECPR1Q7Z6L1 1165 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 LRRC49Q8IUZ0 686 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 LSMEM2Q8N112 164 aa9.59□□□□□ -0.87
MSH5-218ENST00000494646 SNIP1Q8TAD8 396 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
MSH5-218ENST00000494646 NAT6Q93015 286 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms