RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 FAM131BQ86XD5 332 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 RYBPQ8N488 228 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 WDR36Q8NI36 951 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 HSPH1Q92598 858 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 FUBP1Q96AE4 644 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 IFT43Q96FT9 208 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 FEM1CQ96JP0 617 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 HAPLN3Q96S86 360 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CCNL2Q96S94 520 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 IL12RB2Q99665 862 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 C1QTNF2Q9BXJ5 285 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 MAK16Q9BXY0 300 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 FRMD8P1Q9BZ68 369 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 EPB41L5Q9HCM4 733 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 ARHGEF38Q9NXL2 777 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 GULP1Q9UBP9 304 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 ZNF212Q9UDV6 495 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 APOBEC3BQ9UH17 382 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 IL17BQ9UHF5 180 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 C16orf96A6NNT2 1141 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 H3BM21 787 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 FPGTO14772 594 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 MMP20O60882 483 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ITGB6P18564 788 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ITIH1P19827 911 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ITGB7P26010 798 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 IL1R2P27930 398 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 OR1E1P30953 314 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CXCR5P32302 372 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ADRA1BP35368 520 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 RABIFP47224 123 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 MARCKSL1P49006 195 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CCL7P80098 99 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 NRG1Q02297 640 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.511e-6■□□□□ 11.3
CSNK1E-212ENST00000494610 SGCGQ13326 291 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 LONRF2Q1L5Z9 754 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CARD16Q5EG05 197 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ATXN7L2Q5T6C5 722 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 SPOCD1Q6ZMY3 1216 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 PHACTR4Q8IZ21 702 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ARL14Q8N4G2 192 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 DCAF4L2Q8NA75 395 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 KYQ8NBH2 561 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 TTC13Q8NBP0 860 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC114Q96M63 670 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 PEBP4Q96S96 227 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 OSBPL8Q9BZF1 889 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 DHX35Q9H5Z1 703 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 HECAQ9UBI9 543 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 PADI4Q9UM07 663 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CSNK1G3Q9Y6M4 447 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 SCN8AQ9UQD0 1980 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 UNC13CQ8NB66 2214 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 NBASA2RRP1 2371 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 LRRK1Q38SD2 2015 aa11.84□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC187A0A096LP49 1063 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 A0A1W2PQM1 296 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 FGGP02679 453 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 KDELR1P24390 212 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 UGT1A5P35504 534 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 ETV5P41161 510 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CDKN2BP42772 138 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 RECQLP46063 649 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 SERPINH1P50454 418 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CSRP3P50461 194 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 TPI1P60174 286 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 SPIDRQ14159 915 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 COLEC12Q5KU26 742 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 FAXCQ5TGI0 409 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CYP4V2Q6ZWL3 525 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 BZW1Q7L1Q6 419 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 SLC13A5Q86YT5 568 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 DCP2Q8IU60 420 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CREG2Q8IUH2 290 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 SDR16C5Q8N3Y7 309 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CCDC185Q8N715 623 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 COG1Q8WTW3 980 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 TSACCQ96A04 125 aaPredicted RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CCDC74AQ96AQ1 378 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 CENPTQ96BT3 561 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 PPP1R16AQ96I34 528 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 WRAP53Q9BUR4 548 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 FAM117AQ9C073 453 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 RETREG1Q9H6L5 497 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 PCDH18Q9HCL0 1135 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 ATP13A1Q9HD20 1204 aa11.83□□□□□ -0.52
CSNK1E-212ENST00000494610 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms