RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 VSTM4Q8IW00 320 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 KYQ8NBH2 561 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 OR56A4Q8NGH8 313 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 SLC35G2Q8TBE7 412 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 CTNNBL1Q8WYA6 563 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 MAML1Q92585 1016 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 FAF2Q96CS3 445 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 TBATAQ96M53 351 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 WDR92Q96MX6 357 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 TMEM168Q9H0V1 697 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 TSPY26PQ9H489 355 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 DEF6Q9H4E7 631 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 RBM22Q9NW64 420 aaKnown RBP eCLIP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 RCOR3Q9P2K3 495 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-219ENST00000494069 UVRAGQ9P2Y5 699 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 PADI4Q9UM07 663 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 HYOU1Q9Y4L1 999 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 RAI2Q9Y5P3 530 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 SHROOM3Q8TF72 1996 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
LRCH3-219ENST00000494069 COL27A1Q8IZC6 1860 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 C3orf70A6NLC5 250 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CACNB4O00305 520 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 MATN3O15232 486 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 AKR1B10O60218 316 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 FZD6O60353 706 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 MFAP3LO75121 409 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 PRLP01236 227 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 HLA-DQB2P05538 268 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 PTMSP20962 102 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 KDELR1P24390 212 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 SERPINB6P35237 376 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 POLD2P49005 469 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 BLKP51451 505 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 KIAA1024LP59773 190 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 GABREP78334 506 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ELOCQ15369 112 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ISXQ2M1V0 245 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ARMC12Q5T9G4 340 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ESRP1Q6NXG1 681 aaKnown RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 NPNTQ6UXI9 565 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 TECPR1Q7Z6L1 1165 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 HEATR4Q86WZ0 1026 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 BBS5Q8N3I7 341 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 FSTL5Q8N475 847 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ARRDC2Q8TBH0 407 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 NSMCE1Q8WV22 266 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 NUS1Q96E22 293 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 SCRN2Q96FV2 425 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ATXN7L3BQ96GX2 97 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 NAF1Q96HR8 494 aaKnown RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 DEPDC7Q96QD5 511 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 MCCC1Q96RQ3 725 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 RBM15Q96T37 977 aaKnown RBP eCLIP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 LGMNQ99538 433 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CCDC3Q9BQI4 270 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ZNF670Q9BS34 389 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 SYNDIG1Q9H7V2 258 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-219ENST00000494069 USP29Q9HBJ7 922 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CYP4F12Q9HCS2 524 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 DTLQ9NZJ0 730 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CD84Q9UIB8 345 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 MOSPD1Q9UJG1 213 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 PHTF1Q9UMS5 762 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 TFR2Q9UP52 801 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 GPR34Q9UPC5 381 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 CHKBQ9Y259 395 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 TTLL3Q9Y4R7 772 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 ENTPD2Q9Y5L3 495 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 DGKBQ9Y6T7 804 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 LRP4O75096 1905 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 BPTFQ12830 3046 aa8.54□□□□□ -1.04
LRCH3-219ENST00000494069 PRSS38A1L453 326 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 LRRD1A4D1F6 860 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 GOLGA6CA6NDK9 693 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 GOLGA6BA6NDN3 693 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 KCNK1O00180 336 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 AGRPO00253 132 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 NOBOXO60393 691 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 SOD1P00441 154 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 JCHAINP01591 159 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CEACAM5P06731 702 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TPM3P06753 285 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 KRT7P08729 469 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-219ENST00000494069 GOLGA6DP0CG33 693 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 TNNT1P13805 278 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CCNB1P14635 433 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CCNCP24863 283 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 MAN1A1P33908 653 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 RPIAP49247 311 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 PDX1P52945 283 aa8.53□□□□□ -1.04
LRCH3-219ENST00000494069 CCL7P80098 99 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms