RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 VWA7Q9Y334 891 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TRAF6Q9Y4K3 522 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MROH6A6NGR9 719 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 KCNU1A8MYU2 1149 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ANGPT2O15123 496 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 CFLARO15519 480 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MAP3K13O43283 966 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 CLASP2O75122 1294 aaKnown RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 HLA-DQB2P05538 268 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 BMP2P12643 396 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ZNF23P17027 643 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 SAT1P21673 171 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 PSMA4P25789 261 aaKnown RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 GABRB3P28472 473 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 PBX3P40426 434 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MAGEA11P43364 429 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 GLRBP48167 497 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MLLT6P55198 1093 aaPredicted RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 RING1Q06587 406 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 BFSP2Q13515 415 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 SEPT6Q14141 434 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 CSHL1Q14406 222 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 TLR1Q15399 786 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 LRRC36Q1X8D7 754 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 LRRC23Q53EV4 343 aaPredicted RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 HECTD2Q5U5R9 776 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 KIAA0319Q5VV43 1072 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 OGFOD2Q6N063 350 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ESRP1Q6NXG1 681 aaKnown RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 C8orf82Q6P1X6 216 aaPredicted RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 GPRIN1Q7Z2K8 1008 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 DHFR2Q86XF0 187 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 CROCCP3Q8IVE0 287 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MIER2Q8N344 545 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MINDY1Q8N5J2 469 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 TMEM102Q8N9M5 508 aaPredicted RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 MFSD2AQ8NA29 543 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 HIPK4Q8NE63 616 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 OR2T34Q8NGX1 318 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 OR2T3Q8NH03 318 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ADAM32Q8TC27 787 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 NDRG1Q92597 394 aaKnown RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 C19orf60Q96EN9 201 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 BTN2A3PQ96KV6 586 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 C8orf48Q96LL4 319 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 GAD1Q99259 594 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 PKMYT1Q99640 499 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 C9orf16Q9BUW7 83 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 SLC2A11Q9BYW1 496 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ANKRD60Q9BZ19 345 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 SHCBP1LQ9BZQ2 653 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 SLC39A8Q9C0K1 460 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 POLR1EQ9GZS1 481 aaKnown RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 CXCL16Q9H2A7 254 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ABCD2Q9UBJ2 740 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ST3GAL5Q9UNP4 418 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 SLC8A2Q9UPR5 921 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 LZTS1Q9Y250 596 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 MYRFQ9Y2G1 1151 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
RFC4-214ENST00000494047 PCDHGA7Q9Y5G6 932 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 GMEB1Q9Y692 573 aa11.51□□□□□ -0.57
RFC4-214ENST00000494047 ANKRD36A6QL64 1941 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 NLRC5Q86WI3 1866 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 IGLV3-10A0A075B6K4 115 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 GIPC1O14908 333 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 SNAP91O60641 907 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
RFC4-214ENST00000494047 H6PDO95479 791 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 MLYCDO95822 493 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 GLP2RO95838 553 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 PYGLP06737 847 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 CCDC166P0CW27 439 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 SMIM18P0DKX4 95 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 TPH1P17752 444 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 BDNFP23560 247 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 ITGB8P26012 769 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 ARNTP27540 789 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 RFC2P35250 354 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 SLC5A3P53794 718 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 MPP1Q00013 466 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 CTBP1Q13363 440 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 SLC5A9Q2M3M2 681 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.5□□□□□ -0.57
RFC4-214ENST00000494047 MTX3Q5HYI7 312 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 ZNF678Q5SXM1 525 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 ALG1LQ6GMV1 187 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 LCN8Q6JVE9 175 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 PSRC1Q6PGN9 363 aaPredicted RBP11.5□□□□□ -0.57
RFC4-214ENST00000494047 OTOP3Q7RTS5 596 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 CEP97Q8IW35 865 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 DENND6AQ8IWF6 608 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 EDEM1Q92611 657 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
RFC4-214ENST00000494047 CELF6Q96J87 481 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms