RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 LENG8Q96PV6 779 aaPredicted RBP11.68□□□□□ -0.54
UBA3-211ENST00000493957 RTKNQ9BST9 563 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 GPR27Q9NS67 375 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 TM7SF3Q9NS93 570 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 DNPEPQ9ULA0 475 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 PNMA8BQ9ULN7 279 aaPredicted RBP11.68□□□□□ -0.54
UBA3-211ENST00000493957 BTBD3Q9Y2F9 522 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 PPIL1Q9Y3C6 166 aa11.68□□□□□ -0.54
UBA3-211ENST00000493957 A0A1B0GTQ1 180 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 CAPN8A6NHC0 703 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 K7ESM1 405 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 FPGTO14772 594 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 SDC3O75056 442 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 CES1P23141 567 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 PSMB4P28070 264 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 ETV3P41162 512 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 CHRNA4P43681 627 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 BNIP3Q12983 259 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 FZD2Q14332 565 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 ACOX1Q15067 660 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 SIX1Q15475 284 aaPredicted RBP11.67□□□□□ -0.54
UBA3-211ENST00000493957 LRRC66Q68CR7 880 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 KCTD16Q68DU8 428 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 IL27RAQ6UWB1 636 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 USP45Q70EL2 814 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 PIP4P1Q86T03 277 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 PRUNE1Q86TP1 453 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 CBARPQ8N350 705 aaPredicted RBP11.67□□□□□ -0.54
UBA3-211ENST00000493957 SLC35F6Q8N357 371 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 DENND6BQ8NEG7 585 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 DEFB124Q8NES8 71 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 SLC35B2Q8TB61 432 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 C1orf54Q8WWF1 131 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
UBA3-211ENST00000493957 MLPHQ9BV36 600 aaPredicted RBP11.67□□□□□ -0.54
UBA3-211ENST00000493957 CARD9Q9H257 536 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 CD84Q9UIB8 345 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 HS3ST3A1Q9Y663 406 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 COL5A1P20908 1838 aaPredicted RBP11.67□□□□□ -0.54
UBA3-211ENST00000493957 ASXL3Q9C0F0 2248 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 RP1P56715 2156 aa11.67□□□□□ -0.54
UBA3-211ENST00000493957 A0A1W2PQ67 120 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 MTSS1O43312 755 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 SH3BP5O60239 455 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 CLDN7O95471 211 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 ATP1A1P05023 1023 aaKnown RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 ATXN1LP0C7T5 689 aaKnown RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 CYP2A6P11509 494 aaPredicted RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 CCT8P50990 548 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 WNT3AP56704 352 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 EIF2B5Q13144 721 aaKnown RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 SNX1Q13596 522 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 PDE1CQ14123 709 aaPredicted RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 INPP5AQ14642 412 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 PUM1Q14671 1186 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBA3-211ENST00000493957 LRRC14Q15048 493 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 CDKN3Q16667 212 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 ZNF569Q5MCW4 686 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 ANKRD20A2Q5SQ80 823 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 ANKRD20A3Q5VUR7 823 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 Q6ZVL8 140 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 TAB3Q8N5C8 712 aaPredicted RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 FAM71DQ8N9W8 422 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 IPMKQ8NFU5 416 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 NUS1Q96E22 293 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 DTD2Q96FN9 168 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 FCRL5Q96RD9 977 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 TMEM121Q9BTD3 319 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 GBA3Q9H227 469 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 TCEAL2Q9H3H9 227 aaPredicted RBP11.66□□□□□ -0.54
UBA3-211ENST00000493957 HAUS2Q9NVX0 235 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 SMARCAL1Q9NZC9 954 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 KLF15Q9UIH9 416 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 OR1A2Q9Y585 309 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 SPO11Q9Y5K1 396 aa11.66□□□□□ -0.54
UBA3-211ENST00000493957 PIKFYVEQ9Y2I7 2098 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 CFAP69A5D8W1 941 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 GOLGA6L9A6NEM1 432 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 ANKRD66B4E2M5 251 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 AURKAO14965 403 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 SCAMP1O15126 338 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 LIASO43766 372 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 CEP104O60308 925 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 SLC4A1P02730 911 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 ZNF883P0CG24 379 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 CA4P22748 312 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 EPHA8P29322 1005 aaPredicted RBP11.65□□□□□ -0.54
UBA3-211ENST00000493957 RABIFP47224 123 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 STC1P52823 247 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 PTSQ03393 145 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 CDK18Q07002 472 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 CCDC173Q0VFZ6 552 aa11.65□□□□□ -0.54
UBA3-211ENST00000493957 OVGP1Q12889 678 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms