RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 TMCO6Q96DC7 493 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 PPP1R13BQ96KQ4 1090 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 SIGLEC11Q96RL6 698 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 EDEM3Q9BZQ6 932 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 ALDH8A1Q9H2A2 487 aaPredicted RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 CYSLTR2Q9NS75 346 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 PSD3Q9NYI0 1048 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 CISD1Q9NZ45 108 aaKnown RBP6.28□□□□□ -1.4
SMC2-205ENST00000493955 NFE2L3Q9Y4A8 694 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 DMRT1Q9Y5R6 373 aa6.28□□□□□ -1.4
SMC2-205ENST00000493955 A0A1W2PR77 199 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 FAM170AA1A519 330 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 TMEM202A6NGA9 273 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 A6NNC1 897 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 STMND1H3BQB6 276 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 ADAMDEC1O15204 470 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 OGG1O15527 345 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 AVILO75366 819 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 GPC4O75487 556 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 CBSLP0DN79 551 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 TRIM21P19474 475 aaKnown RBP6.27□□□□□ -1.41
SMC2-205ENST00000493955 CERS1P27544 350 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 ACADLP28330 430 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 CBSP35520 551 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 PPP3CCP48454 512 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 MRPS34P82930 218 aaKnown RBP6.27□□□□□ -1.41
SMC2-205ENST00000493955 ZNF91Q05481 1191 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 FHL2Q14192 279 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 PLEKHA7Q6IQ23 1121 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 DEF8Q6ZN54 512 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 PLPPR4Q7Z2D5 763 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 TSPAN33Q86UF1 283 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 GPSM1Q86YR5 675 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 TDRD5Q8NAT2 981 aaKnown RBP6.27□□□□□ -1.41
SMC2-205ENST00000493955 SCCPDHQ8NBX0 429 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 ZNF622Q969S3 477 aaKnown RBP eCLIP6.27□□□□□ -1.417e-7■■■□□ 14.8
SMC2-205ENST00000493955 ZNF653Q96CK0 615 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 SPATA17Q96L03 361 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 ZNF570Q96NI8 536 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 DGAT2Q96PD7 388 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 GAD1Q99259 594 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 AGAP2Q99490 1192 aa6.27□□□□□ -1.41
SMC2-205ENST00000493955 C1orf226A1L170 272 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 A8MXE2 369 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 H3BQ06 376 aaPredicted RBP6.26□□□□□ -1.41
SMC2-205ENST00000493955 CHL1O00533 1208 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 TLX3O43711 291 aaPredicted RBP6.26□□□□□ -1.41
SMC2-205ENST00000493955 MYBL1P10243 752 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 MMP9P14780 707 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 MYF6P23409 242 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 COL10A1Q03692 680 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 DPTQ07507 201 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 GRAPQ13588 217 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 KCNC3Q14003 757 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 C2orf68Q2NKX9 166 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 ZXDCQ2QGD7 858 aaPredicted RBP6.26□□□□□ -1.41
SMC2-205ENST00000493955 EPHA10Q5JZY3 1008 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 RARS2Q5T160 578 aaKnown RBP6.26□□□□□ -1.41
SMC2-205ENST00000493955 HECTD3Q5T447 861 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 PQLC2Q6ZP29 291 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 DPPA4Q7L190 304 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 SLFN11Q7Z7L1 901 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 EPHX4Q8IUS5 362 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 TEX45Q8NA69 505 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 TASP1Q9H6P5 420 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 MAP6D1Q9H9H5 199 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 MRGBPQ9NV56 204 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 MSRB1Q9NZV6 116 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 C5AR2Q9P296 337 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 ANAPC2Q9UJX6 822 aa6.26□□□□□ -1.41
SMC2-205ENST00000493955 PPP6CO00743 305 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 VCYO14598 125 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 TBCAO75347 108 aaKnown RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 BCAR3O75815 825 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 NDUFB4O95168 129 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 GGPS1O95749 300 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 HIST1H2ABP04908 130 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 CHRNB1P11230 501 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 CD58P19256 250 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 HIST1H2ADP20671 130 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 DCAF6Q58WW2 860 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 KRT80Q6KB66 452 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 HIST3H2AQ7L7L0 130 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 AACSQ86V21 672 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 GALNT13Q8IUC8 556 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 MCEMP1Q8IX19 187 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 MB21D2Q8IYB1 491 aaPredicted RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 SCYL3Q8IZE3 742 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 GSDMBQ8TAX9 411 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 SLC35F5Q8WV83 523 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 VPS33AQ96AX1 596 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 ACOX2Q99424 681 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 WDR77Q9BQA1 342 aaPredicted RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 PCGF1Q9BSM1 259 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 MSTO1Q9BUK6 570 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 TMPRSS5Q9H3S3 457 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 GPR108Q9NPR9 543 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 TMEM184CQ9NVA4 438 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 FBXW11Q9UKB1 542 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 PLAGL1Q9UM63 463 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms