RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	AFAP1L2	Q8N4X5	818 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	ALLC	Q8N6M5	410 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	PRCC	Q92733	491 aa	Predicted RBP	11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	ACSF2	Q96CM8	615 aa	Predicted RBP	11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	TCEAL4	Q96EI5	215 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	TOE1	Q96GM8	510 aa	Known RBP	11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	FAR2	Q96K12	515 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	UHRF1	Q96T88	793 aa	Predicted RBP	11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	HEMGN	Q9BXL5	484 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	GON7	Q9BXV9	100 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	LHX5	Q9H2C1	402 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	S100A14	Q9HCY8	104 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	NMRK1	Q9NWW6	199 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	TRPS1	Q9UHF7	1281 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	ENOPH1	Q9UHY7	261 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	TSPAN16	Q9UKR8	245 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	DTX4	Q9Y2E6	619 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	NR2E1	Q9Y466	385 aa		11.65	□□□□□ -0.54
BRCA1-222	ENST00000493919	RNF225	M0QZC1	329 aa	Predicted RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	AKAP10	O43572	662 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	BEST1	O76090	585 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ALB	P02768	609 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	CSH1	P0DML2	217 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	CSH2	P0DML3	217 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	KRT3	P12035	628 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	CXCR2	P25025	360 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ACSL1	P33121	698 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	RCVRN	P35243	200 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	GARS	P41250	739 aa	Known RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	PCP4	P48539	62 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	HARS2	P49590	506 aa	Known RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	KCNJ2	P63252	427 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	CKAP4	Q07065	602 aa	Known RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	FAM76B	Q5HYJ3	339 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	TCTE1	Q5JU00	501 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SNAP47	Q5SQN1	464 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	C6orf10	Q5SRN2	563 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	DUPD1	Q68J44	220 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	CLEC20A	Q6ZU45	233 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ASRGL1	Q7L266	308 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	OTOP3	Q7RTS5	596 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ZC3H18	Q86VM9	953 aa	Known RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ZNF354C	Q86Y25	554 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	TMC8	Q8IU68	726 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SLC22A9	Q8IVM8	553 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	LEMD2	Q8NC56	503 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	OR8K3	Q8NH51	312 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	RFWD2	Q8NHY2	731 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ATXN3L	Q9H3M9	355 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	EPS8L2	Q9H6S3	715 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	NLRC4	Q9NPP4	1024 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ATP13A2	Q9NQ11	1180 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SYBU	Q9NX95	663 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	PRKAG3	Q9UGI9	489 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	DMTF1	Q9Y222	760 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ERGIC3	Q9Y282	383 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SIK3	Q9Y2K2	1263 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	GPSM3	Q9Y4H4	160 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	NOTCH4	Q99466	2003 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	TTC28	Q96AY4	2481 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	MYO16	Q9Y6X6	1858 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919		A0A1B0GTH6	734 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ACOD1	A6NK06	481 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919		M0QYV0	167 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	PSMD11	O00231	422 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	NRG2	O14511	850 aa	Predicted RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	EPHB6	O15197	1021 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	THAP12	O43422	761 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	HSMCR30	P0CW71	290 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	NPR3	P17342	541 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	DRD4	P21917	467 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	RFX1	P22670	979 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	GNA15	P30679	374 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	GALNS	P34059	522 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	RAD52	P43351	418 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SLC5A3	P53794	718 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SLC12A2	P55011	1212 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	COPS2	P61201	443 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	RPL26	P61254	145 aa	Known RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	CYP4F8	P98187	520 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	DRAP1	Q14919	205 aa	Predicted RBP	11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	GALNTL6	Q49A17	601 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	IYD	Q6PHW0	289 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	NPAS3	Q8IXF0	933 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	FGF13	Q92913	245 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	BORCS5	Q969J3	196 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	RAD51AP1	Q96B01	352 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	MYADM	Q96S97	322 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	SMO	Q99835	787 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	PACSIN1	Q9BY11	444 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	GAN	Q9H2C0	597 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	TMEM245	Q9H330	911 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ECT2	Q9H8V3	914 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	ACP6	Q9NPH0	428 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	BDP1	A6H8Y1	2624 aa		11.64	□□□□□ -0.55
BRCA1-222	ENST00000493919	PATJ	Q8NI35	1801 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919	TARM1	B6A8C7	271 aa		11.63	□□□□□ -0.55
BRCA1-222	ENST00000493919		O00370	1275 aa		11.63	□□□□□ -0.55

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