RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SAE1Q9UBE0 346 aaPredicted RBP22.65■■□□□ 1.22
SNIP1-203ENST00000493916 ASPMQ8IZT6 3477 aa22.65■■□□□ 1.22
SNIP1-203ENST00000493916 CCDC66A2RUB6 948 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 GRID2IPA4D2P6 1211 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 TPP1O14773 563 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 ETV3P41162 512 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 GSDMDP57764 484 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 PTPRRQ15256 657 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 LLGL1Q15334 1064 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 SLC14A2Q15849 920 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 ALG11Q2TAA5 492 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 LRRC66Q68CR7 880 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 CRTC1Q6UUV9 634 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 UNQ6494/PRO21346Q6UXR6 183 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 BBS12Q6ZW61 710 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 LMX1AQ8TE12 382 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 FUBP1Q96AE4 644 aaKnown RBP22.64■■□□□ 1.21
SNIP1-203ENST00000493916 IMP4Q96G21 291 aaKnown RBP22.64■■□□□ 1.21
SNIP1-203ENST00000493916 LYSMD1Q96S90 227 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 CEP41Q9BYV8 373 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 WDR26Q9H7D7 661 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 USP29Q9HBJ7 922 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 SEPT10Q9P0V9 454 aa22.64■■□□□ 1.21
SNIP1-203ENST00000493916 CACNB4O00305 520 aaPredicted RBP22.63■■□□□ 1.21
SNIP1-203ENST00000493916 MTSS1O43312 755 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 RASGRP1O95267 797 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 CKMT1AP12532 417 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 TSHRP16473 764 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 PTPN3P26045 913 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 TEAD1P28347 426 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 PTPN7P35236 360 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 HK3P52790 923 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 KIF5AQ12840 1032 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 TEX44Q53QW1 395 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 CCDC157Q569K6 752 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 PRRT3Q5FWE3 981 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 FAXCQ5TGI0 409 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 DENND2CQ68D51 928 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 ZCCHC8Q6NZY4 707 aaKnown RBP22.63■■□□□ 1.21
SNIP1-203ENST00000493916 ENPP7Q6UWV6 458 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 DHRS13Q6UX07 377 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 CCNI2Q6ZMN8 369 aaPredicted RBP22.63■■□□□ 1.21
SNIP1-203ENST00000493916 TECPR1Q7Z6L1 1165 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 NT5DC3Q86UY8 548 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 RAVER1Q8IY67 606 aaKnown RBP22.63■■□□□ 1.21
SNIP1-203ENST00000493916 LPCAT1Q8NF37 534 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 TADA1Q96BN2 335 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 AGAP3Q96P47 875 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 DESI2Q9BSY9 194 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 SLC25A51Q9H1U9 297 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 KLQ9UEF7 1012 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 EFR3BQ9Y2G0 817 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 DGKBQ9Y6T7 804 aa22.63■■□□□ 1.21
SNIP1-203ENST00000493916 ARID1BQ8NFD5 2236 aaPredicted RBP22.62■■□□□ 1.21
SNIP1-203ENST00000493916 LMO7DNF2Z398 122 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 GCATO75600 419 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 KELP23276 732 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 SRP54P61011 504 aaKnown RBP22.62■■□□□ 1.21
SNIP1-203ENST00000493916 DPTQ07507 201 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 Q6ZVL8 140 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 B4GALNT4Q76KP1 1039 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 PELI3Q8N2H9 469 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 FSTL5Q8N475 847 aaPredicted RBP22.62■■□□□ 1.21
SNIP1-203ENST00000493916 APOLD1Q96LR9 279 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 QKIQ96PU8 341 aaKnown RBP eCLIP22.62■■□□□ 1.21
SNIP1-203ENST00000493916 SMIM14Q96QK8 99 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 ADGRE3Q9BY15 652 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 EVA1BQ9NVM1 165 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 NCKIPSDQ9NZQ3 722 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 LRP4O75096 1905 aa22.62■■□□□ 1.21
SNIP1-203ENST00000493916 PTPRBP23467 1997 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 LY6G6EA0A0G2JKS1 128 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 HACD1B0YJ81 288 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 C1QTNF9BB2RNN3 333 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 APOC4-APOC2K7ER74 178 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TNFRSF10CO14798 259 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 APOC2P02655 101 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 C1QTNF9P0C862 333 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 STC1P52823 247 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 RWDD2BP57060 319 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 DAB2P98082 770 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 PTSQ03393 145 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 QPCTQ16769 361 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 ZNF765Q7L2R6 523 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TMPRSS12Q86WS5 348 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 HID1Q8IV36 788 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 SYCE1Q8N0S2 351 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 OR56A4Q8NGH8 313 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TSACCQ96A04 125 aaPredicted RBP22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TEKT5Q96M29 485 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TRIB3Q96RU7 358 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 RBM15Q96T37 977 aaKnown RBP eCLIP22.61■■□□□ 1.21
SNIP1-203ENST00000493916 HEMGNQ9BXL5 484 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TEX101Q9BY14 249 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 CLPBQ9H078 707 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 GLOD4Q9HC38 313 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 TRIM10Q9UDY6 481 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 U3KQA8 63 aa22.61■■□□□ 1.21
SNIP1-203ENST00000493916 WDFY3Q8IZQ1 3526 aa22.6■■□□□ 1.21
SNIP1-203ENST00000493916 MACROD2A1Z1Q3 448 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms