RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PLAC1Q9HBJ0 212 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 ARGLU1Q9NWB6 273 aaPredicted RBP19.39■□□□□ 0.69
USP39-218ENST00000493829 EBF1Q9UH73 591 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 SCML1Q9UN30 329 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 CYP8B1Q9UNU6 501 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 COQ6Q9Y2Z9 468 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 A0A0C4DFX4 3053 aa19.39■□□□□ 0.69
USP39-218ENST00000493829 STX7O15400 261 aaKnown RBP19.38■□□□□ 0.69
USP39-218ENST00000493829 PCDH8O95206 1070 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 POLBP06746 335 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 LPOP22079 712 aaPredicted RBP19.38■□□□□ 0.69
USP39-218ENST00000493829 CXCL12P48061 93 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 LIG3P49916 1009 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 ADPRHP54922 357 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 ANKRD20A4Q4UJ75 823 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 ALS2CLQ60I27 953 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 RFLNAQ6ZTI6 216 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 HSD11B1LQ7Z5J1 315 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 CXorf40AQ8TE69 158 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 LRRC4CQ9HCJ2 640 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 CD84Q9UIB8 345 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 PKP3Q9Y446 797 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 BPTFQ12830 3046 aa19.38■□□□□ 0.69
USP39-218ENST00000493829 FAM237BA0A1B0GVD1 139 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 GOLGA8KD6RF30 607 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 GOLGA8TH3BQL2 631 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 MMP20O60882 483 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 H2AFXP16104 143 aaPredicted RBP19.37■□□□□ 0.69
USP39-218ENST00000493829 CCR3P51677 355 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 ARSDP51689 593 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 ACOX1Q15067 660 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 TSSK4Q6SA08 328 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 OR13J1Q8NGT2 312 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 PTCD2Q8WV60 388 aaKnown RBP19.37■□□□□ 0.69
USP39-218ENST00000493829 RLN3Q8WXF3 142 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 RAB7BQ96AH8 199 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 SUDS3Q9H7L9 328 aaPredicted RBP19.37■□□□□ 0.69
USP39-218ENST00000493829 MRM3Q9HC36 420 aaKnown RBP19.37■□□□□ 0.69
USP39-218ENST00000493829 FKBPLQ9UIM3 349 aa19.37■□□□□ 0.69
USP39-218ENST00000493829 PLRG1O43660 514 aaKnown RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 PIAS1O75925 651 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 USP1O94782 785 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 C6P13671 934 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 ETV3P41162 512 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 PTSQ03393 145 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 UAP1Q16222 522 aaPredicted RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 TRMT10BQ6PF06 316 aaKnown RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 USP30Q70CQ3 517 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 RELL1Q8IUW5 271 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 TMEM105Q8N8V8 129 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP39-218ENST00000493829 ZBTB9Q96C00 473 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 SRPK1Q96SB4 655 aaKnown RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 NAT9Q9BTE0 207 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 PPANQ9NQ55 473 aaKnown RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 TREX1Q9NSU2 369 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 USP36Q9P275 1121 aaKnown RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 FZD4Q9ULV1 537 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 INVSQ9Y283 1065 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 ZCWPW2A0A1B0GU75 182 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 MAGEB16A2A368 324 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 FAM86C2PA6NEL3 165 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 OR51F1A6NGY5 319 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 RIPK2O43353 540 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 TTC4O95801 387 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 ACSL1P33121 698 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 HMGCLP35914 325 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 HSD17B3P37058 310 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 MAGEA9P43362 315 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 SUOXP51687 545 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 STC1P52823 247 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 CCDC15Q0P6D6 951 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 SPANXN3Q5MJ09 141 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 STEAP4Q687X5 459 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 SEL1L3Q68CR1 1132 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 LIPIQ6XZB0 460 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 C3orf62Q6ZUJ4 267 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 TRMT10CQ7L0Y3 403 aaKnown RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 TMEM135Q86UB9 458 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 KBTBD6Q86V97 674 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 FAM160A2Q8N612 972 aaPredicted RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 FRMD1Q8N878 549 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 GSDMBQ8TAX9 411 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 STYXQ8WUJ0 223 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 TTC25Q96NG3 672 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 IER2Q9BTL4 223 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 EPB41L4BQ9H329 900 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 EPHX3Q9H6B9 360 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 NLE1Q9NVX2 485 aaPredicted RBP19.36■□□□□ 0.69
USP39-218ENST00000493829 IL17CQ9P0M4 197 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 SLC17A6Q9P2U8 582 aa19.36■□□□□ 0.69
USP39-218ENST00000493829 NCOR1O75376 2440 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 LRRK1Q38SD2 2015 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 K7ESF4 209 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 GPR39O43194 453 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 VAPBO95292 243 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 F7P08709 466 aaPredicted RBP19.35■□□□□ 0.69
USP39-218ENST00000493829 ZNF30P17039 623 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 BPIP17213 487 aa19.35■□□□□ 0.69
USP39-218ENST00000493829 CLCN5P51795 746 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms