RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 PARS2Q7L3T8 475 aaKnown RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 RASSF3Q86WH2 238 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 LMNTD2Q8IXW0 634 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 CNPY4Q8N129 248 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 PPM1NQ8N819 430 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 IL17RCQ8NAC3 791 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 GPR150Q8NGU9 434 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 PIP4K2CQ8TBX8 421 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 SCG3Q8WXD2 468 aaKnown RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 ARRDC3Q96B67 414 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 ZBTB9Q96C00 473 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 CDKN2AIPNLQ96HQ2 116 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 CPNE1Q99829 537 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 RSPH9Q9H1X1 276 aaPredicted RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 ZDHHC4Q9NPG8 344 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 C20orf96Q9NUD7 363 aaPredicted RBP12.67□□□□□ -0.38
VPS52-220ENST00000493674 NSMCE4AQ9NXX6 385 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 ZFATQ9P243 1243 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 SLC17A6Q9P2U8 582 aa12.67□□□□□ -0.38
VPS52-220ENST00000493674 TLDC2A0PJX2 215 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 HMX2A2RU54 273 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 SMIM23A6NLE4 172 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 C16orf96A6NNT2 1141 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 RGS16O15492 202 aaPredicted RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 RNF40O75150 1001 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 EPHX1P07099 455 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 INHBAP08476 426 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 NTSR1P30989 418 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 MMP12P39900 470 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 SERPINB9P50453 376 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 SUOXP51687 545 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 GRSF1Q12849 480 aaKnown RBP eCLIP12.66□□□□□ -0.38
VPS52-220ENST00000493674 RALGDSQ12967 914 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 PTPRCAPQ14761 206 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 MLF2Q15773 248 aaPredicted RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 FBXO43Q4G163 708 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 SLC44A4Q53GD3 710 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 CRTC1Q6UUV9 634 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 KIAA0408Q6ZU52 694 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 MICALCLQ6ZW33 695 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 DPPA4Q7L190 304 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 DSG4Q86SJ6 1040 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 TRABD2AQ86V40 505 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 CTAGE3PQ8IX95 158 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 CBARPQ8N350 705 aaPredicted RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 C2CD4AQ8NCU7 369 aaPredicted RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 OR4K2Q8NGD2 314 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 HDAC10Q969S8 669 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 FAM131CQ96AQ9 280 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 TBATAQ96M53 351 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 RBBP8Q99708 897 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 FAM167BQ9BTA0 163 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 STMN4Q9H169 189 aaPredicted RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 FBRSQ9HAH7 460 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 ZFYVE1Q9HBF4 777 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 NFKBIL1Q9UBC1 381 aaPredicted RBP12.66□□□□□ -0.38
VPS52-220ENST00000493674 B4GALT6Q9UBX8 382 aa12.66□□□□□ -0.38
VPS52-220ENST00000493674 LRP4O75096 1905 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 TECTAO75443 2155 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 A0A0U1RQS6 177 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 C1orf232A0A0U1RR37 186 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 CCL22O00626 93 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 GAPDHSO14556 408 aaPredicted RBP12.65□□□□□ -0.38
VPS52-220ENST00000493674 AREL1O15033 823 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 DCXO43602 365 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 BUD23O43709 281 aaKnown RBP12.65□□□□□ -0.38
VPS52-220ENST00000493674 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
VPS52-220ENST00000493674 ZNF30P17039 623 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 OGNP20774 298 aaKnown RBP12.65□□□□□ -0.38
VPS52-220ENST00000493674 CNTFP26441 200 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 GABRB3P28472 473 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 OAS2P29728 719 aaKnown RBP12.65□□□□□ -0.38
VPS52-220ENST00000493674 VIPR1P32241 457 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 FOXN2P32314 431 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 TIE1P35590 1138 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 GP5P40197 560 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 HADHAP40939 763 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 SLC1A2P43004 574 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 CSRP3P50461 194 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 STC1P52823 247 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 METAP1P53582 386 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 COPAP53621 1224 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 PTPN5P54829 565 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 XIAPP98170 497 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 PRKCQQ04759 706 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 PEX6Q13608 980 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 TMED2Q15363 201 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 TYSND1Q2T9J0 566 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 HSF5Q4G112 596 aaPredicted RBP12.65□□□□□ -0.38
VPS52-220ENST00000493674 LRRC66Q68CR7 880 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 NEPROQ6NW34 567 aa12.65□□□□□ -0.38
VPS52-220ENST00000493674 AFTPHQ6ULP2 937 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms