RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 SP110Q9HB58 689 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 GEMIN8Q9NWZ8 242 aaKnown RBP12.35□□□□□ -0.43
SAMM50-205ENST00000493621 DONSONQ9NYP3 566 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 TAAR2Q9P1P5 351 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 AP4E1Q9UPM8 1137 aa12.35□□□□□ -0.43
SAMM50-205ENST00000493621 IGHV5-10-1A0A0J9YXX1 117 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 TTC24A2A3L6 582 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 DFFAO00273 331 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 TRAFD1O14545 582 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 HGSO14964 777 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 DAPK3O43293 454 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ECEL1O95672 775 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 TPM2P07951 284 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 DESP17661 470 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 AK4P27144 223 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 GNPDA1P46926 289 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 SCNN1BP51168 640 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ARSDP51689 593 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ILF3Q12906 894 aaKnown RBP eCLIP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 BIRC2Q13490 618 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 CA9Q16790 459 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 DENND2CQ68D51 928 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ARHGAP36Q6ZRI8 547 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ZNF438Q7Z4V0 828 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 HEATR4Q86WZ0 1026 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 PATE1Q8WXA2 126 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 NKD1Q969G9 470 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 PMEPA1Q969W9 287 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 NUS1Q96E22 293 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 COQ10AQ96MF6 247 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 TAAR9Q96RI9 348 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 AGPAT1Q99943 283 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 SLC12A9Q9BXP2 914 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 PHPT1Q9NRX4 125 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-205ENST00000493621 B4GALT6Q9UBX8 382 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 SIK3Q9Y2K2 1263 aa12.34□□□□□ -0.43
SAMM50-205ENST00000493621 ZW10O43264 779 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 FUCA1P04066 466 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 CEACAM5P06731 702 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 LIFP15018 202 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 CD1CP29017 333 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 TLE1Q04724 770 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.44
SAMM50-205ENST00000493621 IL10RBQ08334 325 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 NSUN2Q08J23 767 aaKnown RBP eCLIP12.33□□□□□ -0.44
SAMM50-205ENST00000493621 NR1D2Q14995 579 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 CNGA3Q16281 694 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 CDKAL1Q5VV42 579 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 NKAIN2Q5VXU1 208 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 BORAQ6PGQ7 559 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 SLC30A9Q6PML9 568 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 PTRH1Q86Y79 214 aaKnown RBP12.33□□□□□ -0.44
SAMM50-205ENST00000493621 ARHGAP12Q8IWW6 846 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 PDCD6IPQ8WUM4 868 aaKnown RBP12.33□□□□□ -0.44
SAMM50-205ENST00000493621 PTCD2Q8WV60 388 aaKnown RBP12.33□□□□□ -0.44
SAMM50-205ENST00000493621 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
SAMM50-205ENST00000493621 TEX101Q9BY14 249 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 ADNPQ9H2P0 1102 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 SUFUQ9UMX1 484 aa12.33□□□□□ -0.44
SAMM50-205ENST00000493621 GOLGA6CA6NDK9 693 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 GOLGA6BA6NDN3 693 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 GOLGA6DP0CG33 693 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 ERCC2P18074 760 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 MPSTP25325 297 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 PSMA2P25787 234 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 VIPR1P32241 457 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 GPR3P46089 330 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 POLD2P49005 469 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 RENBPP51606 427 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 LIMK2P53671 638 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 AP1S1P61966 158 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 SLC10A7Q0GE19 358 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 RFTN1Q14699 578 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 LBRQ14739 615 aaKnown RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 CLPPQ16740 277 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 CT47A1Q5JQC4 288 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 ERMARDQ5T6L9 678 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 ACAD10Q6JQN1 1059 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 RFX8Q6ZV50 586 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 MCOLN2Q8IZK6 566 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 NPWQ8N729 165 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 ART4Q93070 314 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 SNRNP25Q9BV90 132 aaKnown RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 FRMD8Q9BZ67 464 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 TRNAU1APQ9NX07 287 aaKnown RBP12.32□□□□□ -0.44
SAMM50-205ENST00000493621 GOLGA6AQ9NYA3 693 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 SEPT3Q9UH03 358 aa12.32□□□□□ -0.44
SAMM50-205ENST00000493621 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms