RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 TRADDQ15628 312 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 CDKN3Q16667 212 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 DRICH1Q6PGQ1 229 aaPredicted RBP10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 NPNTQ6UXI9 565 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 PCDH20Q8N6Y1 951 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 TTC13Q8NBP0 860 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 ATL2Q8NHH9 583 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 PCDH19Q8TAB3 1148 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 ACTL9Q8TC94 416 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 GRK7Q8WTQ7 553 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 IFT81Q8WYA0 676 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 SLCO2A1Q92959 643 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 NXPE2Q96DL1 559 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 HMCESQ96FZ2 354 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 CCDC114Q96M63 670 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 WRAP53Q9BUR4 548 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 C1QTNF2Q9BXJ5 285 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 TRIM31Q9BZY9 425 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 RAB17Q9H0T7 212 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 DPH5Q9H2P9 285 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 TMEM248Q9NWD8 314 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 CWC15Q9P013 229 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 PPARGC1AQ9UBK2 798 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 LHX3Q9UBR4 397 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 DNPEPQ9ULA0 475 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 UTP11Q9Y3A2 253 aaKnown RBP10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 MFHAS1Q9Y4C4 1052 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 LRP4O75096 1905 aa10.29□□□□□ -0.76
SOX2-OT-215ENST00000493521 RP1P56715 2156 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 SPTY2D1-AS1A0A0U1RR47 76 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 TTC24A2A3L6 582 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 A6NNZ2 444 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 H3BRJ5 948 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 J3KR12 359 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 APOC4-APOC2K7ER74 178 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 AGRPO00253 132 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 EEF2KO00418 725 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 AREL1O15033 823 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 YKT6O15498 198 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 DAPK3O43293 454 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 CREB3O43889 395 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 APOC2P02655 101 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 C1SP09871 688 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 CKMT1AP12532 417 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 TIMP2P16035 220 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 RHOQP17081 205 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 AMPD1P23109 780 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 TNFRSF8P28908 595 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 HNF1BP35680 557 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 ARL4AP40617 200 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 CARSP49589 748 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PDX1P52945 283 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PFN3P60673 137 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 OVGP1Q12889 678 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PTPRRQ15256 657 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PPP1R7Q15435 360 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 NEK5Q6P3R8 708 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 TMCO3Q6UWJ1 677 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 KYAT3Q6YP21 454 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 ARHGAP36Q6ZRI8 547 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 SPACA3Q8IXA5 215 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PELI3Q8N2H9 469 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 OXR1Q8N573 874 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 TP53I13Q8NBR0 393 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 SLC35B2Q8TB61 432 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 LMX1AQ8TE12 382 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 CENPTQ96BT3 561 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 TBC1D31Q96DN5 1066 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 ERP44Q9BS26 406 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 FRMD8P1Q9BZ68 369 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 CPNE5Q9HCH3 593 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 DYRK4Q9NR20 520 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 RCOR3Q9P2K3 495 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 FEZ2Q9UHY8 353 aaPredicted RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 DRG1Q9Y295 367 aaKnown RBP10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 PTPRQQ9UMZ3 2332 aa10.28□□□□□ -0.76
SOX2-OT-215ENST00000493521 RASA4BC9J798 803 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 MUSKO15146 869 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 RASA4O43374 803 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 KDELR3O43731 214 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 USP12O75317 370 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 CSO75390 466 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 GAS8O95995 478 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 CSF2P04141 144 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 NME1P15531 152 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 ZFXP17010 805 aaPredicted RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 JUNDP17535 347 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 RECQLP46063 649 aaPredicted RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 EIF3EP60228 445 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 RPS21P63220 83 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 NRG1Q02297 640 aaPredicted RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 TLE3Q04726 772 aa10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 SRSF6Q13247 344 aaKnown RBP10.27□□□□□ -0.77
SOX2-OT-215ENST00000493521 CUL1Q13616 776 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms